RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ccdc163A2AGD7 326 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gbp4A4UUI3 631 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Sbk3P0C5K0 361 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Acvr2bP27040 536 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Impdh1P50096 514 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 1700061G19RikQ08EE8 705 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Arhgef9Q3UTH8 516 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fbxw11Q5SRY7 542 aaKnown RBP11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Q5XFZ0 217 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vps72Q62481 368 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr20Q7TRX9 314 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Chst2Q80WV3 530 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cdkn3Q810P3 211 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cpped1Q8BFS6 312 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Rdh12Q8BYK4 316 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tbc1d20Q9D9I4 402 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tmprss6Q9DBI0 811 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Btbd19S4R1I0 287 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Kifc3O35231 824 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cldn5O54942 218 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Dlx2P40764 332 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 CtswP56203 371 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Copz1P61924 177 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 D13Ertd608eQ3UPR8 151 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ipcef1Q5DU31 406 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Zzz3Q6KAQ7 910 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cyp2c54Q6XVG2 490 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr1105Q7TR58 312 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Bag5Q8CI32 447 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr807Q8VGI9 311 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ptbp2Q91Z31 531 aaKnown RBP11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Glod4Q9CPV4 298 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Themis3Q9CU24 569 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Elp3Q9CZX0 547 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Det1Q9D0A0 550 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 MispQ9D279 648 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pik3cgQ9JHG7 1102 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tgm1Q9JLF6 815 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Trip4Q9QXN3 581 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 SqorQ9R112 450 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Scn1aA2APX8 2009 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Numa1E9Q7G0 2094 aaKnown RBP11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Oas1eA0A0J9YV76 386 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cdk2ap1O35207 114 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Sult3a1O35403 293 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vti1bO88384 232 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Klf10O89091 479 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 S100a6P14069 89 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Kcnc1P15388 511 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vps26aP40336 327 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Kcnab2P62482 367 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cnih3Q6ZWS4 160 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Lurap1lQ8K2P1 221 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Dhx34Q9DBV3 1145 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Krt6bQ9Z331 562 aa11.25□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm28576A0A087WRP6 222 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cyp4a12bA2A974 508 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vmn2r50E9PW61 861 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Hes2O54792 157 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 SelpQ01102 768 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gsdmc2Q2KHK6 480 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Mpzl3Q3V3F6 237 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Actr3bQ641P0 418 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pfkfb4Q6DTY7 469 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Hspbap1Q8BK58 483 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Amz1Q8BVF9 502 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fam221bQ8C627 487 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Rcor1Q8CFE3 480 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Aldh4a1Q8CHT0 562 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tmem203Q8R235 136 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vps4aQ8VEJ9 437 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cyp4a12aQ91WL5 508 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Erap1Q9EQH2 930 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olig2Q9EQW6 323 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm21293E9Q4G9 266 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Brcc3P46737 291 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Kcnab3P97382 249 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cpne9Q1RLL3 553 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Etaa1Q5SVT3 877 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Slc6a3Q61327 619 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fndc11Q80WB0 326 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 B3galnt2Q8BG28 504 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ablim1Q8K4G5 861 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tmem80Q9D3H0 123 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Il21Q9ES17 146 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Rfc2Q9WUK4 349 aaKnown RBP11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Arfgef1G3X9K3 1846 aaKnown RBP11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm3248K7N721 186 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr1022L7MTT3 315 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vmn2r31L7N1Z4 861 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 CcnoP0C242 352 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cyp2b10P12791 500 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Psmd3P14685 530 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Anxa6P14824 673 aaKnown RBP11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 PenkP22005 268 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Il1rnP25085 178 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cdh9P70407 786 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr1252Q7TQZ2 314 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Arl5aQ80ZU0 179 aa11.24□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cpsf4Q8BQZ5 211 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 59.3 ms