RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Neto2Q8BNJ6 525 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nlrp10Q8CCN1 673 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Acap1Q8K2H4 740 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Mrpl45Q9D0Q7 306 aaKnown RBP10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rnf128Q9D304 428 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Hspb11Q9D6H2 143 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Lrrc69Q9D9Q0 347 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ift22Q9DAI2 185 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Krt28A6BLY7 462 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zfp952B0V2W4 504 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm6502L7N456 481 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 JtbO88824 146 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Hsf2P38533 535 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 PitpnaP53810 271 aaKnown RBP10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Syndig1lQ3USQ7 237 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Fads6Q80UG1 342 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Kcng4Q80XM3 506 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 NfascQ810U3 1240 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Hyal5Q812F3 526 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 OsgepQ8BWU5 335 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Wdr59Q8C0M0 992 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Hectd2Q8CDU6 774 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Camkk1Q8VBY2 505 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 MiosQ8VE19 875 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr1302Q8VGE9 315 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rad51cQ924H5 366 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cby3Q9CVN6 235 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gpc1Q9QZF2 557 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr1040A2ARY1 313 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Serpine3E9Q6A2 401 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Tsc22d2E9Q7M2 769 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zc3h12bG3X9I7 835 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Olfr694K7N641 315 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Wnt8aQ64527 354 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 MogsQ80UM7 834 aaKnown RBP10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 UnkQ8BL48 810 aaKnown RBP10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 St7lQ8K4P7 559 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nudt4Q8R2U6 179 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ndufs2Q91WD5 463 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nphs2Q91X05 385 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Prps2Q9CS42 318 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Dsn1Q9CYC5 348 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Trmt10bQ9D075 318 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Nol3Q9D1X0 220 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Clec2gQ9D676 269 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Dnajb9Q9QYI6 222 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Zfp945E9PYM8 794 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Gm3488M0QW81 238 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 DckP43346 260 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Plin2P43883 425 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Aldh3a2P47740 484 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Npr3P70180 536 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 DtymkP97930 212 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Lpcat4Q6NVG1 524 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Smpd4Q6ZPR5 823 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Sdr16c5Q7TQA3 309 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Taf5Q8C092 801 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ift80Q8K057 777 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Rbms2Q8VC70 383 aaKnown RBP10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 AclyQ91V92 1091 aaKnown RBP10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cyp4f13Q99N19 523 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 GarsQ9CZD3 729 aaKnown RBP10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Ttyh1Q9D3A9 450 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Inpp5eQ9JII1 647 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Cog8Q9JJA2 640 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 ChmlQ9QZD5 621 aa10.09□□□□□ -0.79
Ubr1-201ENSMUST00000028728 Pramef6A2A8M8 474 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Sema3aO08665 772 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 TP20293 436 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Slc6a4Q60857 630 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zfp759Q7M6X3 721 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zic5Q7TQ40 622 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 NkrfQ8BY02 690 aaKnown RBP10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Hid1Q8R1F6 788 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 AcmsdQ8R519 336 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr1499Q8VG65 314 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Map4k3Q99JP0 894 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ankrd61Q9CQM6 421 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Prl8a6Q9DAY2 240 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Myg1Q9JK81 380 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rpl9-ps1S4R1R7 191 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ndufaf6A2AIL4 333 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm3642K7N6V4 267 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fam71e2L7N480 754 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Hoxa11P31311 313 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Hdac2P70288 488 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Igfbp5Q07079 271 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Oscp1Q8BHW2 379 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zbtb33Q8BN78 671 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 SynpoQ8CC35 929 aaKnown RBP10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Aldh4a1Q8CHT0 562 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Sbk1Q8QZX0 417 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tspan8Q8R3G9 235 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ak5Q920P5 562 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Piwil1Q9JMB7 862 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mageb4A2A9R3 556 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cxcr3O88410 367 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 EnpepP16406 945 aa10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rap1gap2Q5SVL6 712 aaKnown RBP10.08□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Bcl2l1Q64373 233 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms