RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Usp51B1AY15 661 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 TriqkB2B9E1 86 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Btg4O70552 250 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cd3gP11942 182 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cpa3P15089 417 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Guca1aP43081 202 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rnf19aP50636 840 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Tmc5Q32NZ6 967 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cdkl4Q3TZA2 342 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Usp7Q6A4J8 1103 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr1355Q7TQU9 310 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Samd4aQ8CBY1 711 aaKnown RBP8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Kctd5Q8VC57 234 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 NoboxQ8VIH1 527 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 FcrlaQ920A9 352 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 AasdhpptQ9CQF6 309 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Tex12Q9CR81 123 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Bcas2Q9D287 225 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Akr1a1Q9JII6 325 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pex11bQ9Z210 259 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Tspoap1Q7TNF8 1846 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Col4a3Q9QZS0 1669 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm3604A0A087WPN2 559 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 6720489N17RikA0A1Y7VJW0 127 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cyp2a22B2RXZ2 492 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Catsperg2C6KI89 1145 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gp5O08742 567 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ech1O35459 327 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pip5k1bP70181 539 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Tgm3Q08189 693 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Slc22a23Q3UHH2 689 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Trit1Q80UN9 467 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Znf569Q80W31 679 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Snx32Q80ZJ7 404 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zfp438Q8BFX2 798 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Tmem198Q8BG75 360 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Znf276Q8CE64 614 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 H2-Q4Q8HWB2 354 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mrgpra2Q91WW4 305 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pycr2Q922Q4 320 aaKnown RBP8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pacsin3Q99JB8 424 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Bbs2Q9CWF6 721 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Prokr1Q9JKL1 393 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Habp4Q9JKS5 411 aaKnown RBP8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Adam17Q9Z0F8 827 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gm42688A0A0R3P9D1 673 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr652B9EHE6 318 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 4930426L09RikE9Q0N7 123 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Il1rl1P14719 567 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Kcnj9P48543 393 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 TsnQ62348 228 aaKnown RBP8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Hist2h2acQ64523 129 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Hist2h2aa1Q6GSS7 130 aaKnown RBP8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ip6k1Q6PD10 433 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ppp2r1bQ7TNP2 601 aaKnown RBP8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 TpbglQ8C013 384 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ccdc142Q8CAI1 738 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rab36Q8CAM5 267 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Bdh2Q8JZV9 245 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Akr1c13Q8VC28 323 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr846Q8VET8 312 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cacng3Q9JJV5 315 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mad2l1Q9Z1B5 205 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ccdc120A2AEV7 629 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vmn2r120E9PX34 856 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 GhrP16882 650 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ubtfl1Q3USZ2 394 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Arcn1Q5XJY5 511 aaKnown RBP8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Brsk2Q69Z98 735 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cpa4Q6P8K8 420 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vrk2Q8BN21 503 aaKnown RBP8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Cnot3Q8K0V4 751 aaKnown RBP8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr1311Q8VET0 312 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr1325Q8VF43 315 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Crtc3Q91X84 619 aa8.42□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Brca1P48754 1812 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Syndig1A2ANU3 258 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pramef17A2ASJ1 475 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Olfr620E9PZ66 313 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Zfp938E9Q9G3 579 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Lim2P56563 173 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Bcap29Q61334 240 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 IfneQ80ZF2 192 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Kansl2Q8BQR4 486 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rab15Q8K386 212 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Kcnc4Q8R1C0 628 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gemin6Q9CX53 166 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Atp5oQ9DB20 213 aaKnown RBP8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Mapk9Q9WTU6 423 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Stau1Q9Z108 487 aaKnown RBP8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Znf536Q8K083 1302 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Vmn2r111K7N674 857 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Polr2jO08740 117 aaKnown RBP8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Gstm1P10649 218 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pex2P55098 305 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Ctps1P70698 591 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Pag1Q3U1F9 429 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Nr1h2Q60644 446 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Fam149b1Q6NSV7 578 aa8.41□□□□□ -1.06
Sf3b1-201ENSMUST00000027127 Rslcan18Q7M6X5 460 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms