RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 BEND6Q5SZJ8 279 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-213ENST00000642137 LYSMD4Q5XG99 296 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 KYAT3Q6YP21 454 aaKnown RBP12.21□□□□□ -0.45
LINC00339-213ENST00000642137 GCNT7Q6ZNI0 430 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 KIAA0408Q6ZU52 694 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 IQCHQ86VS3 1027 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 SLC26A11Q86WA9 606 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 SERPINA9Q86WD7 417 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 DCP2Q8IU60 420 aaKnown RBP12.21□□□□□ -0.45
LINC00339-213ENST00000642137 CILP2Q8IUL8 1156 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 PIANPQ8IYJ0 282 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 NXPE1Q8N323 547 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 MFSD2AQ8NA29 543 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 C2CD4AQ8NCU7 369 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-213ENST00000642137 DDHD1Q8NEL9 900 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 KLHDC7BQ96G42 594 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 CYTH2Q99418 400 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 ACSS3Q9H6R3 686 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 TRIM39Q9HCM9 518 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 IL1RAPL1Q9NZN1 696 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 MARCH4Q9P2E8 410 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-213ENST00000642137 FBXO5Q9UKT4 447 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 VPS9D1Q9Y2B5 631 aa12.21□□□□□ -0.45
LINC00339-213ENST00000642137 IGLV3-16A0A075B6K0 115 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 UQCRHLA0A096LP55 91 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 A0A1W2PR77 199 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 A6NNZ2 444 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 CACNB4O00305 520 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 MAGEC1O60732 1142 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 NDUFS3O75489 264 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 S1PR4O95977 384 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 UQCRHP07919 91 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 PRSS56P0CW18 603 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 MYCLP1P12525 358 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 H2AFXP16104 143 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 PMLP29590 882 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 HSD17B3P37058 310 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 LEPRP48357 1165 aaKnown RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 KIAA1024LP59773 190 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 TMEM115Q12893 351 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 ILF2Q12905 390 aaKnown RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 CTBP1Q13363 440 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 UAP1Q16222 522 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 DBN1Q16643 649 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 TYSND1Q2T9J0 566 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 KBTBD12Q3ZCT8 623 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 UBAP2Q5T6F2 1119 aaKnown RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 GPRC6AQ5T6X5 926 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 RNF187Q5TA31 235 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 Q6ZSR6 202 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 MICALCLQ6ZW33 695 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 HEATR4Q86WZ0 1026 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 PHYKPLQ8IUZ5 450 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 GDAP1Q8TB36 358 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 FUBP1Q96AE4 644 aaKnown RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 SKA1Q96BD8 255 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 LOXL4Q96JB6 756 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 COPS8Q99627 209 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 MYOCQ99972 504 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 CCDC77Q9BR77 488 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 LGR4Q9BXB1 951 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 MIR1-1HGQ9H1L0 117 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 WDR26Q9H7D7 661 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 TM9SF3Q9HD45 589 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 SMYD2Q9NRG4 433 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 AASDHPPTQ9NRN7 309 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 INTS10Q9NVR2 710 aaKnown RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 ZFATQ9P243 1243 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 VPS18Q9P253 973 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 SUSD2Q9UGT4 822 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 PILRBQ9UKJ0 227 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 CA5BQ9Y2D0 317 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 SPAG17Q6Q759 2223 aa12.2□□□□□ -0.46
LINC00339-213ENST00000642137 TNRC6BQ9UPQ9 1833 aaKnown RBP12.2□□□□□ -0.46
LINC00339-213ENST00000642137 A0A1B0GTW7 788 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 CXorf49A8MYA2 514 aaPredicted RBP12.19□□□□□ -0.46
LINC00339-213ENST00000642137 GPR89AB7ZAQ6 455 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 CFAP99D6REC4 459 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 H0Y8X5 98 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 TNFRSF10CO14798 259 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 INPP4BO15327 924 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 BCAT2O15382 392 aaPredicted RBP12.19□□□□□ -0.46
LINC00339-213ENST00000642137 GPR39O43194 453 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 VEGFDO43915 354 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 HAUS5O94927 633 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 AHSGP02765 367 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 GPR89BP0CG08 455 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 THEGLP0DJG4 465 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 RALBP11234 206 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 ATP1B2P14415 290 aaPredicted RBP12.19□□□□□ -0.46
LINC00339-213ENST00000642137 GNSP15586 552 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 ZNF7P17097 686 aaPredicted RBP12.19□□□□□ -0.46
LINC00339-213ENST00000642137 MSH3P20585 1137 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 KELP23276 732 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 ITPKAP23677 461 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 HTR1BP28222 390 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 NSG1P42857 185 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 ADARP55265 1226 aaKnown RBP12.19□□□□□ -0.46
LINC00339-213ENST00000642137 TCF15Q12870 199 aa12.19□□□□□ -0.46
LINC00339-213ENST00000642137 PTK2BQ14289 1009 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms