RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PYROXD1Q8WU10 500 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 ZNF669Q96BR6 464 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 SCRN2Q96FV2 425 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 ZNF578Q96N58 590 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 LYSMD1Q96S90 227 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 SRPK1Q96SB4 655 aaKnown RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 TRIM56Q9BRZ2 755 aaKnown RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 GPR63Q9BZJ6 419 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 TRABDQ9H4I3 376 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 MRM3Q9HC36 420 aaKnown RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 MAGEE1Q9HCI5 957 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 SERGEFQ9UGK8 458 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 ZC3H7BQ9UGR2 993 aaKnown RBP9.37□□□□□ -0.91
PHGDH-228ENST00000641847 SOX13Q9UN79 622 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 ITM2BQ9Y287 266 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 PPIL1Q9Y3C6 166 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 ARL5AQ9Y689 179 aa9.37□□□□□ -0.91
PHGDH-228ENST00000641847 A0A0U1RQS6 177 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 C1orf232A0A0U1RR37 186 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 FAM237BA0A1B0GVD1 139 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 CCDC78A2IDD5 438 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 A8MX80 341 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 H0Y8X5 98 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 LDB2O43679 373 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 BUD23O43709 281 aaKnown RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 ACSL3O95573 720 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 IGLV3-19P01714 112 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 SUOXP51687 545 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 IL9RQ01113 521 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 ZBTB16Q05516 673 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 ELP6Q0PNE2 266 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 RALGDSQ12967 914 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 LAMB3Q13751 1172 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 CRYMQ14894 314 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 TAF1AQ15573 450 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 CNGA3Q16281 694 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 KYNUQ16719 465 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 ANKRD20A4Q4UJ75 823 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 SPANXN3Q5MJ09 141 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 BEND6Q5SZJ8 279 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 UBAP2Q5T6F2 1119 aaKnown RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 TSTD2Q5T7W7 516 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 ARMC3Q5W041 872 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 STEAP4Q687X5 459 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 LRRC66Q68CR7 880 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 CRTC1Q6UUV9 634 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 CES3Q6UWW8 571 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 UNC5AQ6ZN44 842 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 ZNF574Q6ZN55 896 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 TRMT10CQ7L0Y3 403 aaKnown RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 DPPA4Q7L190 304 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 CCNJLQ8IV13 435 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 CACTIN-AS1Q8N1I8 211 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 TTC30BQ8N4P2 665 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 GANCQ8TET4 914 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 UBLCP1Q8WVY7 318 aaPredicted RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 RAB7BQ96AH8 199 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 NAF1Q96HR8 494 aaKnown RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 DNAJC1Q96KC8 554 aaKnown RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 TTC25Q96NG3 672 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 OMDQ99983 421 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 NAT9Q9BTE0 207 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 KIFC1Q9BW19 673 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 DPH1Q9BZG8 443 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 VPS37BQ9H9H4 285 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 ZFYVE1Q9HBF4 777 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 PLAC1Q9HBJ0 212 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 CPNE5Q9HCH3 593 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 TM9SF3Q9HD45 589 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 CHRAC1Q9NRG0 131 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 FBXL12Q9NXK8 326 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 SLC2A6Q9UGQ3 507 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 GGT7Q9UJ14 662 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 CLCA2Q9UQC9 943 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 KCTD3Q9Y597 815 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 FADS3Q9Y5Q0 445 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 RPS6KL1Q9Y6S9 549 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 FLNCQ14315 2725 aa9.36□□□□□ -0.91
PHGDH-228ENST00000641847 ZNF106Q9H2Y7 1883 aaKnown RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 SPTAN1Q13813 2472 aaKnown RBP9.36□□□□□ -0.91
PHGDH-228ENST00000641847 A0A1B0GTQ1 180 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 MAGEB16A2A368 324 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 MROH6A6NGR9 719 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 C2orf81A6NN90 581 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 CCL22O00626 93 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 NEMP1O14524 444 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 AREL1O15033 823 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 SLC7A4O43246 635 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 RIPK2O43353 540 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 SPAG6O75602 509 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 USP1O94782 785 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 CLDN7O95471 211 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 TTC4O95801 387 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 POLBP06746 335 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 ELFN1P0C7U0 828 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 C7P10643 843 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 TSHRP16473 764 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 ZNF30P17039 623 aa9.35□□□□□ -0.91
PHGDH-228ENST00000641847 LPOP22079 712 aaPredicted RBP9.35□□□□□ -0.91
PHGDH-228ENST00000641847 CD27P26842 260 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms