RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 EPB41L4BQ9H329 900 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 DHX35Q9H5Z1 703 aaKnown RBP12.6□□□□□ -0.39
CTSD-208ENST00000636843 ZWILCHQ9H900 591 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 GPATCH2LQ9NWQ4 482 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 ANAPC5Q9UJX4 755 aa12.6□□□□□ -0.39
CTSD-208ENST00000636843 TMEM202A6NGA9 273 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 NVLO15381 856 aaKnown RBP12.59□□□□□ -0.39
CTSD-208ENST00000636843 PRKCGP05129 697 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 ELFN1P0C7U0 828 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 JMJD7P0C870 316 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 IL1R2P27930 398 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 MIPP30301 263 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 TRIM23P36406 574 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 RGRP47804 291 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 RENBPP51606 427 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 ZNF135P52742 658 aaPredicted RBP12.59□□□□□ -0.39
CTSD-208ENST00000636843 ZFP36L1Q07352 338 aaKnown RBP12.59□□□□□ -0.39
CTSD-208ENST00000636843 ADCY2Q08462 1091 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 RALGDSQ12967 914 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 CERCAMQ5T4B2 595 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 KIAA1614Q5VZ46 1190 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 KCTD16Q68DU8 428 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 XKR5Q6UX68 686 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 PLA2G15Q8NCC3 412 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 FAM46DQ8NEK8 389 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 OR2W6PQ8NHA6 318 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 FUBP1Q96AE4 644 aaKnown RBP12.59□□□□□ -0.39
CTSD-208ENST00000636843 SP110Q9HB58 689 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 FGF22Q9HCT0 170 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 ASH1LQ9NR48 2969 aaKnown RBP12.59□□□□□ -0.39
CTSD-208ENST00000636843 DNPEPQ9ULA0 475 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 ZNF148Q9UQR1 794 aa12.59□□□□□ -0.39
CTSD-208ENST00000636843 SETXQ7Z333 2677 aaKnown RBP12.59□□□□□ -0.39
CTSD-208ENST00000636843 TRAFD1O14545 582 aaPredicted RBP12.58□□□□□ -0.4
CTSD-208ENST00000636843 TP73O15350 636 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 RIPK2O43353 540 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 NOBOXO60393 691 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 AP1S1P61966 158 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 IL10RBQ08334 325 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 SLC29A2Q14542 456 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 OASLQ15646 514 aaKnown RBP12.58□□□□□ -0.4
CTSD-208ENST00000636843 CA9Q16790 459 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 KCTD19Q17RG1 926 aaPredicted RBP12.58□□□□□ -0.4
CTSD-208ENST00000636843 C14orf28Q4W4Y0 310 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 IZUMO3Q5VZ72 239 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 RFX8Q6ZV50 586 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 DPPA4Q7L190 304 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 VSIG1Q86XK7 387 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 RELL1Q8IUW5 271 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 PSTKQ8IV42 348 aaKnown RBP12.58□□□□□ -0.4
CTSD-208ENST00000636843 ARHGAP12Q8IWW6 846 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 LZTR1Q8N653 840 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 PAF1Q8N7H5 531 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 Q8N9G6 341 aaPredicted RBP12.58□□□□□ -0.4
CTSD-208ENST00000636843 KCTD6Q8NC69 237 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 SLC35B2Q8TB61 432 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 TEKT4Q8WW24 435 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 ROPN1BQ9BZX4 212 aaPredicted RBP12.58□□□□□ -0.4
CTSD-208ENST00000636843 TMEM168Q9H0V1 697 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 CENPHQ9H3R5 247 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 WDR26Q9H7D7 661 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 ROPN1Q9HAT0 212 aaPredicted RBP12.58□□□□□ -0.4
CTSD-208ENST00000636843 KCTD5Q9NXV2 234 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 LOXL2Q9Y4K0 774 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 UNC13CQ8NB66 2214 aa12.58□□□□□ -0.4
CTSD-208ENST00000636843 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 A0A1W2PQ67 120 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 ERICH4A6NGS2 130 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 DNALI1O14645 258 aaPredicted RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 EFSO43281 561 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 NUDT21O43809 227 aaKnown RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 PRPSAP2O60256 369 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 CST8O60676 142 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 IVLP07476 585 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 ERCC2P18074 760 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 HCAR3P49019 387 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 SCNN1BP51168 640 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 ARHGEF7Q14155 803 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 PDK2Q15119 407 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 TRIP13Q15645 432 aaPredicted RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 SMTNL2Q2TAL5 461 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 BOLA3Q53S33 107 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 HIBCHQ6NVY1 386 aaPredicted RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 PNCKQ6P2M8 343 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 SPRED1Q7Z699 444 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 PCGF5Q86SE9 256 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 MAP7D3Q8IWC1 876 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 PGM2Q96G03 612 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 ZNF599Q96NL3 588 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 PSKH2Q96QS6 385 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 KCTD15Q96SI1 283 aaPredicted RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 CMKLR1Q99788 373 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 SNRNP25Q9BV90 132 aaKnown RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 STMN4Q9H169 189 aaPredicted RBP12.57□□□□□ -0.4
CTSD-208ENST00000636843 PCDH9Q9HC56 1237 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 CYP4F12Q9HCS2 524 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 LRIT1Q9P2V4 623 aa12.57□□□□□ -0.4
CTSD-208ENST00000636843 PISDQ9UG56 409 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms