RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 STX2P32856 288 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 TRIM23P36406 574 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 RABIFP47224 123 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 FNTBP49356 437 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 METAP1P53582 386 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ADARP55265 1226 aaKnown RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 SESN2P58004 480 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 RACK1P63244 317 aaKnown RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 RPL6Q02878 288 aaKnown RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CACNG1Q06432 222 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 PDIA2Q13087 525 aaKnown RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 SEPT6Q14141 434 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 PTK2BQ14289 1009 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CRYMQ14894 314 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 LRRC14Q15048 493 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 BRD3Q15059 726 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 LONRF1Q17RB8 773 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ELOA3BQ3SY89 546 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 LDLRAP1Q5SW96 308 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CERCAMQ5T4B2 595 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 LYSMD4Q5XG99 296 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 MRNIPQ6NTE8 343 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CASC4Q6P4E1 433 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ADAMTSL4Q6UY14 1074 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 PACS1Q6VY07 963 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 SNX20Q7Z614 316 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 SLC26A11Q86WA9 606 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CACUL1Q86Y37 369 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 PHYKPLQ8IUZ5 450 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CNTN4Q8IWV2 1026 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 OXR1Q8N573 874 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 MFSD2AQ8NA29 543 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 TP53I13Q8NBR0 393 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 TMEM145Q8NBT3 493 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 MYRIPQ8NFW9 859 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ELOA3Q8NG57 546 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 OR4K2Q8NGD2 314 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 OR13J1Q8NGT2 312 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 GPR150Q8NGU9 434 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CEP76Q8TAP6 659 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 GSDMBQ8TAX9 411 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 PYROXD1Q8WU10 500 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CDKL2Q92772 493 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CAVIN3Q969G5 261 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ZNF514Q96K75 400 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 APOL2Q9BQE5 337 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 LRFN3Q9BTN0 628 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 SLC17A9Q9BYT1 436 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 SLC6A17Q9H1V8 727 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 FAM83DQ9H4H8 585 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 RMI1Q9H9A7 625 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 GPR27Q9NS67 375 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 INTS10Q9NVR2 710 aaKnown RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 POLR3BQ9NW08 1133 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ARGLU1Q9NWB6 273 aaPredicted RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 C2orf42Q9NWW7 574 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 SYBUQ9NX95 663 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 FETUBQ9UGM5 382 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ZC3H7BQ9UGR2 993 aaKnown RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 RAB23Q9ULC3 237 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ZFR2Q9UPR6 939 aaKnown RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ITM2BQ9Y287 266 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 SPO11Q9Y5K1 396 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 SLC30A1Q9Y6M5 507 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 CACNA1EQ15878 2313 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 PIKFYVEQ9Y2I7 2098 aa6.68□□□□□ -1.34
UPF3B-205ENST00000636792 ZFC3H1O60293 1989 aaKnown RBP6.68□□□□□ -1.34
UPF3B-205ENST00000636792 IGLV3-16A0A075B6K0 115 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 ZCWPW2A0A1B0GU75 182 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 ESYT3A0FGR9 886 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 H3BMM5 538 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 CACNB4O00305 520 aaPredicted RBP6.67□□□□□ -1.34
UPF3B-205ENST00000636792 TNFRSF10CO14798 259 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 YKT6O15498 198 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 VEGFDO43915 354 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 DFNA5O60443 496 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 MMP20O60882 483 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 LRP3O75074 770 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 SRP72O76094 671 aaKnown RBP6.67□□□□□ -1.34
UPF3B-205ENST00000636792 PRAMEF1O95521 474 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 IGHV4-34P06331 123 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 RALBP11234 206 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 MYCLP1P12525 358 aaPredicted RBP6.67□□□□□ -1.34
UPF3B-205ENST00000636792 GNSP15586 552 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 BPIP17213 487 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 GM2AP17900 193 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 HTR1BP28222 390 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 ELK3P41970 407 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 GRIA1P42261 906 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 CARSP49589 748 aaKnown RBP6.67□□□□□ -1.34
UPF3B-205ENST00000636792 TTPAP49638 278 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 PFN3P60673 137 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 PPP2CBP62714 309 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 PPP2CAP67775 309 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 XIAPP98170 497 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 NFATC2Q13469 925 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 PEX6Q13608 980 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 LRP8Q14114 963 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 SPARCL1Q14515 664 aa6.67□□□□□ -1.34
UPF3B-205ENST00000636792 STAT4Q14765 748 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms