RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TRAP1Q12931 704 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 SELPLGQ14242 412 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 CTXN3Q4LDR2 81 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 AFMIDQ63HM1 303 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 PPP4R4Q6NUP7 873 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 CAMK1DQ8IU85 385 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 ADGRG5Q8IZF4 528 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 C2orf69Q8N8R5 385 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 MIPOL1Q8TD10 442 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 C12orf43Q96C57 262 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 L3HYPDHQ96EM0 354 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 MTG1Q9BT17 334 aaPredicted RBP13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 TBCDQ9BTW9 1192 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 EXD2Q9NVH0 621 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 FKBPLQ9UIM3 349 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 PHF24Q9UPV7 400 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 CCDC154A6NI56 674 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 CYBBP04839 570 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 SERPINF2P08697 491 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 AKR1A1P14550 325 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 IL12AP29459 219 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 PSMD7P51665 324 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 ANKS6Q68DC2 871 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 TMEM126BQ8IUX1 230 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 PHYKPLQ8IUZ5 450 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 MDGA1Q8NFP4 955 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 SUSD3Q96L08 255 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 RPF2Q9H7B2 306 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 ATP13A1Q9HD20 1204 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 PRDM5Q9NQX1 630 aaPredicted RBP13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 SARDHQ9UL12 918 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 M0QZQ0 153 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 RPP40O75818 363 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 ATE1O95260 518 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 CD247P20963 164 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 STC1P52823 247 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 LCP2Q13094 533 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 DUSP4Q13115 394 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 SERINC3Q13530 473 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 DCTN2Q13561 401 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 MAPRE1Q15691 268 aaKnown RBP13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 NADSYN1Q6IA69 706 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 KLHL35Q6PF15 583 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 MILR1Q7Z6M3 343 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 ANKRD60Q9BZ19 345 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 ADNPQ9H2P0 1102 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 GKN1Q9NS71 199 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 PCDH10Q9P2E7 1040 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 MED16Q9Y2X0 877 aa13.93□□□□□ -0.18
CACNA1A-228ENST00000636610 MAN1A2O60476 641 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 SNX2O60749 519 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 GDF5P43026 501 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 ESRRGP62508 458 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 SETMARQ53H47 684 aaPredicted RBP13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 FGD3Q5JSP0 725 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 SERINC5Q86VE9 423 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 KLHDC8BQ8IXV7 354 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 CLHC1Q8NHS4 586 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 STAG3L4Q8TBR4 150 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 ISOC1Q96CN7 298 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 SLC39A13Q96H72 371 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 GPATCH1Q9BRR8 931 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 AARSD1Q9BTE6 412 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 TRMOQ9BU70 441 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 TMEM248Q9NWD8 314 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 TAS2R13Q9NYV9 303 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 LMCD1Q9NZU5 365 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 UTS2RQ9UKP6 389 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 ZNF711Q9Y462 761 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 ZNF236Q9UL36 1845 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 RPL17P18621 184 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 VARSP26640 1264 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 KCTD21Q4G0X4 260 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 VARS2Q5ST30 1063 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 LDLRAP1Q5SW96 308 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 NANOGP8Q6NSW7 305 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 BLOC1S3Q6QNY0 202 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 PDZD8Q8NEN9 1154 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 FBXO30Q8TB52 745 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 FUBP1Q96AE4 644 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 MTFMTQ96DP5 389 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 LINGO1Q96FE5 620 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 TSPAN18Q96SJ8 248 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 NANOGQ9H9S0 305 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 CXorf21Q9HAI6 301 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 AGPAT4Q9NRZ5 378 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 GID8Q9NWU2 228 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 PLK2Q9NYY3 685 aa13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 OAS3Q9Y6K5 1087 aaKnown RBP13.92□□□□□ -0.18
CACNA1A-228ENST00000636610 LOC285095A0A1B0GVY8 99 aa13.91□□□□□ -0.18
CACNA1A-228ENST00000636610 GLTPD2A6NH11 291 aa13.91□□□□□ -0.18
CACNA1A-228ENST00000636610 E5RI56 91 aa13.91□□□□□ -0.18
CACNA1A-228ENST00000636610 TLR5O60602 858 aa13.91□□□□□ -0.18
CACNA1A-228ENST00000636610 PARNO95453 639 aaKnown RBP13.91□□□□□ -0.18
CACNA1A-228ENST00000636610 CYP11A1P05108 521 aa13.91□□□□□ -0.18
CACNA1A-228ENST00000636610 BMP2P12643 396 aa13.91□□□□□ -0.18
CACNA1A-228ENST00000636610 CTPS1P17812 591 aa13.91□□□□□ -0.18
CACNA1A-228ENST00000636610 ZNF157P51786 506 aaPredicted RBP13.91□□□□□ -0.18
CACNA1A-228ENST00000636610 HK3P52790 923 aa13.91□□□□□ -0.18
CACNA1A-228ENST00000636610 TWF1Q12792 350 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms