RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 EFHD2Q96C19 240 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 CNDP2Q96KP4 475 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 TMEM74Q96NL1 305 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 TOR3AQ9H497 397 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 EHD1Q9H4M9 534 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 DKK3Q9UBP4 350 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 CD300AQ9UGN4 299 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 PNMA8BQ9ULN7 279 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SNX10Q9Y5X0 201 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 MRPL42Q9Y6G3 142 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 U3KQV3 271 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 ANKRD12Q6UB98 2062 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 CENPXA8MT69 81 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 PPEF2O14830 753 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SLC7A4O43246 635 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 RGS10O43665 173 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 ZNF286BP0CG31 522 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 CHRNA4P43681 627 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 ARPC4P59998 168 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 GRSF1Q12849 480 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 ZNF678Q5SXM1 525 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 NAT16Q8N8M0 369 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 OR9Q1Q8NGQ5 310 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 DUS3LQ96G46 650 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SH3YL1Q96HL8 342 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 NSMCE3Q96MG7 304 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 BBS2Q9BXC9 721 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 TRIM8Q9BZR9 551 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 KAT8Q9H7Z6 458 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 CMTM6Q9NX76 183 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 PSMD11O00231 422 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 MATN3O15232 486 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 TBX1O43435 398 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 BCAS1O75363 584 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 HPCAL1P37235 193 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 PSMD8P48556 350 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 GMPSP49915 693 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 PLA2G16P53816 162 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SIM2Q14190 667 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 TRIP4Q15650 581 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 GRIK4Q16099 956 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 FAM117BQ6P1L5 589 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 BNIPLQ7Z465 357 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SAPCD2Q86UD0 394 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 GPSM1Q86YR5 675 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SCML4Q8N228 414 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SKA2Q8WVK7 121 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 POP5Q969H6 163 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SLCO4A1Q96BD0 722 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SMARCD1Q96GM5 515 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SPON2Q9BUD6 331 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 NFKBIZQ9BYH8 718 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 RMND5AQ9H871 391 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 GPN2Q9H9Y4 310 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 CATSPERZQ9NTU4 200 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 TIMM13Q9Y5L4 95 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 LOC100506127A0A0U1RQW1 187 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 FAM234BA2RU67 622 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SOWAHBA6NEL2 793 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 YJEFN3A6XGL0 299 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 HCRTO43612 131 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 UGT2B11O75310 529 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 WDR47O94967 919 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 C22orf31O95567 290 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 FADS2O95864 444 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 HOXB6P17509 224 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 CAPN3P20807 821 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 OXTRP30559 389 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 FMO4P31512 558 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 CA8P35219 290 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SLC26A3P40879 764 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 DAOAP59103 153 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 MAD2L1Q13257 205 aaPredicted RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 ARMCX4Q5H9R4 360 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 TREML2Q5T2D2 321 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 IRAK1BP1Q5VVH5 260 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 TXNDC11Q6PKC3 985 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 NKAPQ8N5F7 415 aaKnown RBP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 KBTBD8Q8NFY9 601 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 OR13F1Q8NGS4 319 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 SNX27Q96L92 541 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 C12orf42Q96LP6 360 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 NDFIP2Q9NV92 336 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 ERVK-11Q9UQG0 969 aa8.34□□□□□ -1.07
SMARCA2-246ENST00000635739 IGKV6-21A0A0C4DH24 114 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 SH3BP5O60239 455 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 PABPC1P11940 636 aaKnown RBP8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 MATN1P21941 496 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 MTPNP58546 118 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 COPZ1P61923 177 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 CRY1Q16526 586 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 COQ5Q5HYK3 327 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 GCNT7Q6ZNI0 430 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 SPRED1Q7Z699 444 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 PELI3Q8N2H9 469 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 TOP6BLQ8N6T0 577 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 KHSRPQ92945 711 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 ACOX2Q99424 681 aa8.33□□□□□ -1.08
SMARCA2-246ENST00000635739 C1QTNF1Q9BXJ1 281 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms