RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 LCTLQ6UWM7 567 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CYP26C1Q6V0L0 522 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ATF7IPQ6VMQ6 1270 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC36A4Q6YBV0 504 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 B3GNT6Q6ZMB0 384 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 C9orf139Q6ZV77 190 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 NEK10Q6ZWH5 1172 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 TRMT1LQ7Z2T5 733 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 PATL1Q86TB9 770 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 KRTAP7-1Q8IUC3 87 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 TMTC1Q8IUR5 882 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CPOQ8IVL8 374 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SFTPA2Q8IWL1 248 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SMC5Q8IY18 1101 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 PLD5Q8N7P1 536 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 TEX45Q8NA69 505 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SCCPDHQ8NBX0 429 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 C11orf65Q8NCR3 313 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 MCPH1Q8NEM0 835 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ZMIZ2Q8NF64 920 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 OR4N2Q8NGD1 307 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ZCCHC10Q8TBK6 192 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 KCNG4Q8TDN1 519 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CREB3L4Q8TEY5 395 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM216AQ8WUB2 273 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CD101Q93033 1021 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ERGIC1Q969X5 290 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ZUFSPQ96AP4 578 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 KLHL29Q96CT2 875 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ZBTB10Q96DT7 871 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ELP4Q96EB1 424 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 RNF125Q96EQ8 232 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SAAL1Q96ER3 474 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 RRP36Q96EU6 259 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 C3orf30Q96M34 536 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 LRFN5Q96NI6 719 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CSF3RQ99062 836 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SEC62Q99442 399 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 H2AFJQ9BTM1 129 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 MMTAG2Q9BU76 263 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC26A6Q9BXS9 759 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 PAIP1Q9H074 479 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CLK4Q9HAZ1 481 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 MAGEE1Q9HCI5 957 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SMYD2Q9NRG4 433 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 PCDHB16Q9NRJ7 776 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 RASSF1Q9NS23 344 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 RRP7BPQ9NSQ0 103 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ANKRD10Q9NXR5 420 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 C9orf78Q9NZ63 289 aaPredicted RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 HCN3Q9P1Z3 774 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC9A2Q9UBY0 812 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CFDP1Q9UEE9 299 aaPredicted RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 KCNS2Q9ULS6 477 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 TTC7AQ9ULT0 858 aaPredicted RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CDC14AQ9UNH5 594 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 CRYL1Q9Y2S2 319 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 AAR2Q9Y312 384 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 NFS1Q9Y697 457 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 HFM1A2PYH4 1435 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 BLMP54132 1417 aaPredicted RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM135BQ49AJ0 1406 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 TNS2Q63HR2 1409 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 PRAG1Q86YV5 1406 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 PLXNB2O15031 1838 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 SIPA1L1O43166 1804 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 LTBP2Q14767 1821 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 ATXN2Q99700 1313 aaKnown RBP1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 A0A0G2JMZ2 1700 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 LRRC37A2A6NM11 1700 aa1.12□□□□□ -2.23
SMARCB1-209ENST00000635578 KANK1Q14678 1352 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 COL4A5P29400 1685 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 A0A0G2JPF8 293 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 GOLGA6L10A0A0M3HER8 536 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 CCDC189A1A4V9 331 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 A6NLC8 198 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 C17orf100A8MU93 164 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 HNRNPCL2B2RXH8 293 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 HNRNPCL3B7ZW38 293 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 PRAC2D3DTV9 90 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 H3BQ06 376 aaPredicted RBP1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 J3KR12 359 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 SOCS6O14544 535 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 DVL1O14640 695 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 NCAM2O15394 837 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 HOXC11O43248 304 aaPredicted RBP1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 SEC14L5O43304 696 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 EDIL3O43854 480 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 CREB3O43889 395 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 TIPRLO75663 272 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 KDM4BO94953 1096 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 NDUFB4O95168 129 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 MT-CYBP00156 380 aaPredicted RBP1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 ATP1A1P05023 1023 aaKnown RBP1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 HNRNPCL4P0DMR1 293 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 ATP1A3P13637 1013 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 DAOP14920 347 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 CD58P19256 250 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 KCNA5P22460 613 aa1.11□□□□□ -2.23
SMARCB1-209ENST00000635578 GNLYP22749 145 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms