RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 PPHLN1Q8NEY8 458 aaKnown RBP20.11■□□□□ 0.81
PTCD3-220ENST00000627371 OR4C6Q8NH72 309 aa20.11■□□□□ 0.81
PTCD3-220ENST00000627371 ZNF398Q8TD17 642 aa20.11■□□□□ 0.81
PTCD3-220ENST00000627371 PEX13Q92968 403 aa20.11■□□□□ 0.81
PTCD3-220ENST00000627371 CLPBQ9H078 707 aa20.11■□□□□ 0.81
PTCD3-220ENST00000627371 TRIM39Q9HCM9 518 aa20.11■□□□□ 0.81
PTCD3-220ENST00000627371 NLGN3Q9NZ94 848 aa20.11■□□□□ 0.81
PTCD3-220ENST00000627371 CCDC78A2IDD5 438 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 GPR89AB7ZAQ6 455 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 LMO7DNF2Z398 122 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 CCL22O00626 93 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 FFAR2O15552 330 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 UGT1A9O60656 530 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 DNAJC6O75061 913 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 CELA2BP08218 269 aaPredicted RBP20.1■□□□□ 0.81
PTCD3-220ENST00000627371 GPR89BP0CG08 455 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 ALPPL2P10696 532 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 MLNP12872 115 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 CEACAM1P13688 526 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 UGT1A6P19224 532 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 UGT1A1P22309 533 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 UGT1A4P22310 534 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 IVDP26440 423 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 UGT1A3P35503 534 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 UGT1A5P35504 534 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 GNPDA1P46926 289 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 NFATC2Q13469 925 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 WHAMMP3Q1A5X7 153 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 PCID2Q5JVF3 399 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 TSTD2Q5T7W7 516 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 PCGF5Q86SE9 256 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 CAND1Q86VP6 1230 aaKnown RBP20.1■□□□□ 0.81
PTCD3-220ENST00000627371 SDR16C5Q8N3Y7 309 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 OR13J1Q8NGT2 312 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 CDKN2AIPNLQ96HQ2 116 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 TRIM51Q9BSJ1 452 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 DUSP23Q9BVJ7 150 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 TMEM168Q9H0V1 697 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 ASB8Q9H765 288 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 RMI1Q9H9A7 625 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 UGT1A7Q9HAW7 530 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 UGT1A10Q9HAW8 530 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 UGT1A8Q9HAW9 530 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 XAB2Q9HCS7 855 aaKnown RBP20.1■□□□□ 0.81
PTCD3-220ENST00000627371 ARFGAP3Q9NP61 516 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 TRNAU1APQ9NX07 287 aaKnown RBP20.1■□□□□ 0.81
PTCD3-220ENST00000627371 ATXN10Q9UBB4 475 aa20.1■□□□□ 0.81
PTCD3-220ENST00000627371 PIKFYVEQ9Y2I7 2098 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 AGAP14A8MT82 685 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 TPP1O14773 563 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 VEGFDO43915 354 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 NUAK1O60285 661 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 KCNK5O95279 499 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 ITGALP20701 1170 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 MGAT1P26572 445 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 MC4RP32245 332 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 CA5AP35218 305 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 NOVA1P51513 510 aaKnown RBP20.09■□□□□ 0.81
PTCD3-220ENST00000627371 CRADDP78560 199 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 ACVR1Q04771 509 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 KHDC1Q4VXA5 237 aaKnown RBP20.09■□□□□ 0.81
PTCD3-220ENST00000627371 PYCR3Q53H96 274 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 LDLRAP1Q5SW96 308 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 ZNF648Q5T619 568 aaPredicted RBP20.09■□□□□ 0.81
PTCD3-220ENST00000627371 IZUMO3Q5VZ72 239 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 ARMC3Q5W041 872 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 MARK2Q7KZI7 788 aaKnown RBP20.09■□□□□ 0.81
PTCD3-220ENST00000627371 SNX20Q7Z614 316 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 ADGRG6Q86SQ4 1221 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 HOOK3Q86VS8 718 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 GKN2Q86XP6 184 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 GALNT13Q8IUC8 556 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 DDHD1Q8NEL9 900 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 KIF18AQ8NI77 898 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 GDAP1Q8TB36 358 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 SERPINB12Q96P63 405 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 OR2M4Q96R27 311 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 CDC6Q99741 560 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 OR2AG1Q9H205 316 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 SUDS3Q9H7L9 328 aaPredicted RBP20.09■□□□□ 0.81
PTCD3-220ENST00000627371 SYBUQ9NX95 663 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 MRFAP1Q9Y605 127 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 SLC30A1Q9Y6M5 507 aa20.09■□□□□ 0.81
PTCD3-220ENST00000627371 GOLGA8MH3BSY2 632 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 TRIM38O00635 465 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 MTX2O75431 263 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 ANXA6P08133 673 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 ZNF8P17098 575 aaPredicted RBP20.08■□□□□ 0.81
PTCD3-220ENST00000627371 ARSDP51689 593 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 TUBB2AQ13885 445 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 TCEA2Q15560 299 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 DEFB133Q30KQ1 61 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 GPRC6AQ5T6X5 926 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 PSAPL1Q6NUJ1 521 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 LVRNQ6Q4G3 990 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 MAATS1Q7Z4T9 603 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 GPBAR1Q8TDU6 330 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 ULK4Q96C45 1275 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 ZNF778Q96MU6 729 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 TUBB2BQ9BVA1 445 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms