RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 CDH24Q86UP0 819 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 PPP1R3BQ86XI6 285 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 PGBD5Q8N414 524 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 RTL3Q8N8U3 475 aaKnown RBP8.38□□□□□ -1.07
TCF4-258ENST00000627320 GRHL3Q8TE85 626 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 RXFP2Q8WXD0 754 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 CPA5Q8WXQ8 436 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 SHC3Q92529 594 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 MR1Q95460 341 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 BARD1Q99728 777 aaKnown RBP8.38□□□□□ -1.07
TCF4-258ENST00000627320 TSG101Q99816 390 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 GDPD2Q9HCC8 539 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 SARS2Q9NP81 518 aaKnown RBP8.38□□□□□ -1.07
TCF4-258ENST00000627320 SIX2Q9NPC8 291 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 ZNF624Q9P2J8 865 aaPredicted RBP8.38□□□□□ -1.07
TCF4-258ENST00000627320 CPNE7Q9UBL6 633 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 CNOT8Q9UFF9 292 aaKnown RBP8.38□□□□□ -1.07
TCF4-258ENST00000627320 ZNHIT2Q9UHR6 403 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 SH3BGRL2Q9UJC5 107 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 FARSAQ9Y285 508 aaKnown RBP8.38□□□□□ -1.07
TCF4-258ENST00000627320 B3GNT3Q9Y2A9 372 aa8.38□□□□□ -1.07
TCF4-258ENST00000627320 FLNAP21333 2647 aaKnown RBP8.37□□□□□ -1.07
TCF4-258ENST00000627320 C21orf140B9A014 251 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 FOXN3O00409 490 aaPredicted RBP8.37□□□□□ -1.07
TCF4-258ENST00000627320 PMM2O15305 246 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 ZW10O43264 779 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 ASMTLO95671 621 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 CAPN1P07384 714 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 EPHB2P29323 1055 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 SERPINA4P29622 427 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 VIPR1P32241 457 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 SLC19A1P41440 591 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 SCNN1BP51168 640 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 SUOXP51687 545 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 MARSP56192 900 aaKnown RBP8.37□□□□□ -1.07
TCF4-258ENST00000627320 MAXP61244 160 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 BCL2L1Q07817 233 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 ABRQ12979 859 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 IHHQ14623 411 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 PTCHD3Q3KNS1 767 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 INO80DQ53TQ3 878 aaPredicted RBP8.37□□□□□ -1.07
TCF4-258ENST00000627320 IRGCQ6NXR0 463 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 TTI2Q6NXR4 508 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 FAM198BQ6UWH4 519 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 SPNS3Q6ZMD2 512 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 TECPR1Q7Z6L1 1165 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 GALNT13Q8IUC8 556 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 TRIM59Q8IWR1 403 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 NXPE1Q8N323 547 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 CBARPQ8N350 705 aaPredicted RBP8.37□□□□□ -1.07
TCF4-258ENST00000627320 NPWQ8N729 165 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 AMER2Q8N7J2 671 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 ST6GALNAC3Q8NDV1 305 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 GPR150Q8NGU9 434 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 NANOS1Q8WY41 292 aaKnown RBP8.37□□□□□ -1.07
TCF4-258ENST00000627320 THAP4Q8WY91 577 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 CCDC47Q96A33 483 aaKnown RBP8.37□□□□□ -1.07
TCF4-258ENST00000627320 ZNF641Q96N77 438 aaPredicted RBP8.37□□□□□ -1.07
TCF4-258ENST00000627320 NRTNQ99748 197 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 SLC39A8Q9C0K1 460 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 ZNF552Q9H707 407 aaPredicted RBP8.37□□□□□ -1.07
TCF4-258ENST00000627320 LRRC19Q9H756 370 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 TRIM10Q9UDY6 481 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 SLC23A2Q9UGH3 650 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 CNOT6Q9ULM6 557 aaKnown RBP8.37□□□□□ -1.07
TCF4-258ENST00000627320 CTNND2Q9UQB3 1225 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 NEU2Q9Y3R4 380 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 HCFC1P51610 2035 aa8.37□□□□□ -1.07
TCF4-258ENST00000627320 OR52A4PA6NMU1 304 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 FADS2P1A8MWK0 482 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 PRAMEF11O60813 436 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 UBXN7O94888 489 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 ZNF202O95125 648 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 CPP00450 1065 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 MYL1P05976 194 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 MMEP08473 750 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 PDHA1P08559 390 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 BRAFP15056 766 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 LPOP22079 712 aaPredicted RBP8.36□□□□□ -1.07
TCF4-258ENST00000627320 HTR1EP28566 365 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 OTX2P32243 289 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 KRT9P35527 623 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 KIR3DL1P43629 444 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 NOP2P46087 812 aaKnown RBP8.36□□□□□ -1.07
TCF4-258ENST00000627320 GABRB2P47870 512 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 ARCN1P48444 511 aaKnown RBP8.36□□□□□ -1.07
TCF4-258ENST00000627320 PAPOLAP51003 745 aaKnown RBP8.36□□□□□ -1.07
TCF4-258ENST00000627320 EPHA4P54764 986 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 NRG1Q02297 640 aaPredicted RBP8.36□□□□□ -1.07
TCF4-258ENST00000627320 MTA1Q13330 715 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 CA9Q16790 459 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
TCF4-258ENST00000627320 ARMC12Q5T9G4 340 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 ZNF658Q5TYW1 1059 aaPredicted RBP8.36□□□□□ -1.07
TCF4-258ENST00000627320 NAA35Q5VZE5 725 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 CRTC3Q6UUV7 619 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 Q71RC1 249 aaPredicted RBP8.36□□□□□ -1.07
TCF4-258ENST00000627320 ARHGAP12Q8IWW6 846 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 GLIS1Q8NBF1 620 aa8.36□□□□□ -1.07
TCF4-258ENST00000627320 FAM172AQ8WUF8 416 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms