RNA–Protein interactions for RNA: ENST00000626061.2

SNAP23-222, Transcript of synaptosome associated protein 23, human

TSL 5 BASIC

Gene SNAP23, Length 237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP23-222	ENST00000626061	MRPL45	Q9BRJ2	306 aa	Known RBP	6.13	□□□□□ -1.43
SNAP23-222	ENST00000626061	ATG10	Q9H0Y0	220 aa		6.13	□□□□□ -1.43
SNAP23-222	ENST00000626061	EML4	Q9HC35	981 aa	Known RBP	6.13	□□□□□ -1.43
SNAP23-222	ENST00000626061	SPTLC3	Q9NUV7	552 aa		6.13	□□□□□ -1.43
SNAP23-222	ENST00000626061	ZNF701	Q9NV72	531 aa	Predicted RBP	6.13	□□□□□ -1.43
SNAP23-222	ENST00000626061	ITGA11	Q9UKX5	1188 aa		6.13	□□□□□ -1.43
SNAP23-222	ENST00000626061	NME7	Q9Y5B8	376 aa		6.13	□□□□□ -1.43
SNAP23-222	ENST00000626061	TRIM77	I1YAP6	450 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	CCNT1	O60563	726 aa	Known RBP	6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	KLF7	O75840	302 aa	Predicted RBP	6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	CDKL5	O76039	1030 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	BEST1	O76090	585 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	FOLR1	P15328	257 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	EPHB2	P29323	1055 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	IDUA	P35475	653 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	ACTR1B	P42025	376 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	SLC11A2	P49281	568 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	ACTR1A	P61163	376 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	MTM1	Q13496	603 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	SLC12A1	Q13621	1099 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	WSCD2	Q2TBF2	565 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	PLA2G4E	Q3MJ16	856 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	RUSC1-AS1	Q66K80	236 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	LIX1L	Q8IVB5	337 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	SH2D3C	Q8N5H7	860 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	CACTIN	Q8WUQ7	758 aa	Known RBP	6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	KLHL6	Q8WZ60	621 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	ZNF514	Q96K75	400 aa	Predicted RBP	6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	LGR4	Q9BXB1	951 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	RMI1	Q9H9A7	625 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	TUFT1	Q9NNX1	390 aa		6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	6.12	□□□□□ -1.43
SNAP23-222	ENST00000626061	SCAMP2	O15127	329 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	TTI1	O43156	1089 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	HIP1R	O75146	1068 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	IL18RAP	O95256	599 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	MAPT	P10636	758 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	GART	P22102	1010 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	RORA	P35398	523 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	FOXL1	Q12952	345 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	PCSK7	Q16549	785 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	PTCHD3	Q3KNS1	767 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	FAM133B	Q5BKY9	247 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	FAM166A	Q6J272	317 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	WDR59	Q6PJI9	974 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	CWC27	Q6UX04	472 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	PAQR9	Q6ZVX9	377 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	CCDC186	Q7Z3E2	898 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	SFRP1	Q8N474	314 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	TMEM161B	Q8NDZ6	487 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	LRRN4	Q8WUT4	740 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	GATAD1	Q8WUU5	269 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	DDB2	Q92466	427 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	MMTAG2	Q9BU76	263 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	TBC1D10A	Q9BXI6	508 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	C17orf75	Q9HAS0	396 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	NCOA5	Q9HCD5	579 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	SARS2	Q9NP81	518 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	SAMSN1	Q9NSI8	373 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	TRNAU1AP	Q9NX07	287 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	PSD3	Q9NYI0	1048 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	SFMBT1	Q9UHJ3	866 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	GNPTG	Q9UJJ9	305 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	FOXD3	Q9UJU5	478 aa	Predicted RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	HRH3	Q9Y5N1	445 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	ALG6	Q9Y672	507 aa		6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	PHF3	Q92576	2039 aa	Known RBP	6.11	□□□□□ -1.43
SNAP23-222	ENST00000626061	PLXNB1	O43157	2135 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	CCDC66	A2RUB6	948 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	PPP1R12A	O14974	1030 aa	Predicted RBP	6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	VEGFD	O43915	354 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	PALM	O75781	387 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	EBLN1	P0CF75	366 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	AGXT	P21549	392 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	SRP14	P37108	136 aa	Known RBP	6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	SMCP	P49901	116 aa	Predicted RBP	6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	ASCL1	P50553	236 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	CTBS	Q01459	385 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	TOB2	Q14106	344 aa	Predicted RBP	6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	ZNF766	Q5HY98	468 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	MLIP	Q5VWP3	458 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	KIF18B	Q86Y91	864 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	SIAH3	Q8IW03	269 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	SMYD4	Q8IYR2	804 aa	Predicted RBP	6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	TRMT2A	Q8IZ69	625 aa	Known RBP	6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	DAW1	Q8N136	415 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	BANP	Q8N9N5	519 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	OR2Y1	Q8NGV0	311 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	TEKT4	Q8WW24	435 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	KAT2A	Q92830	837 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	FUBP1	Q96AE4	644 aa	Known RBP	6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	HPDL	Q96IR7	371 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	TNFRSF13C	Q96RJ3	184 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	C17orf62	Q9BQA9	187 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	PHACTR1	Q9C0D0	580 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	RBSN	Q9H1K0	784 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	TNKS2	Q9H2K2	1166 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	CSNK1G1	Q9HCP0	422 aa		6.1	□□□□□ -1.43
SNAP23-222	ENST00000626061	MRS2	Q9HD23	443 aa		6.1	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms