RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 PHF19Q5T6S3 580 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 CCDC181Q5TID7 509 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 BBS12Q6ZW61 710 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 TMPRSS9Q7Z410 1059 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 JAMLQ86YT9 394 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 ZNF567Q8N184 647 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 SFRP1Q8N474 314 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 KRT35Q92764 455 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 QKIQ96PU8 341 aaKnown RBP eCLIP10.73□□□□□ -0.69
SSBP4-215ENST00000625926 FCRL5Q96RD9 977 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 FERMT1Q9BQL6 677 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 TRABDQ9H4I3 376 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.73□□□□□ -0.69
SSBP4-215ENST00000625926 ATXN10Q9UBB4 475 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 NFKBIL1Q9UBC1 381 aaPredicted RBP10.73□□□□□ -0.69
SSBP4-215ENST00000625926 TRHDEQ9UKU6 1024 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 PCDHA3Q9Y5H8 950 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 SPO11Q9Y5K1 396 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 PCYT1BQ9Y5K3 369 aaPredicted RBP10.73□□□□□ -0.69
SSBP4-215ENST00000625926 PTPRBP23467 1997 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 ITPR1Q14643 2758 aa10.73□□□□□ -0.69
SSBP4-215ENST00000625926 IGHV1OR21-1A0A087WYE8 117 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 CCDC66A2RUB6 948 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 OR5K4A6NMS3 321 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 BTNL10A8MVZ5 291 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 H7C0C1 242 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 AGRPO00253 132 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 AURKAO14965 403 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 NVLO15381 856 aaKnown RBP10.72□□□□□ -0.69
SSBP4-215ENST00000625926 ACP5P13686 325 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 SLC2A4P14672 509 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 ZNF8P17098 575 aaPredicted RBP10.72□□□□□ -0.69
SSBP4-215ENST00000625926 BPIP17213 487 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 CTNNA2P26232 953 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 HMGCLP35914 325 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 CETN2P41208 172 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 ATP5OP48047 213 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 GPLD1P80108 840 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 MPP3Q13368 585 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 ZNF648Q5T619 568 aaPredicted RBP10.72□□□□□ -0.69
SSBP4-215ENST00000625926 NKAIN2Q5VXU1 208 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 ZDHHC20Q5W0Z9 365 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 IYDQ6PHW0 289 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 KDELC1Q6UW63 502 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 RAD9BQ6WBX8 426 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 ZNF574Q6ZN55 896 aaPredicted RBP10.72□□□□□ -0.69
SSBP4-215ENST00000625926 PHYKPLQ8IUZ5 450 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 SLC25A41Q8N5S1 370 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 OR4D9Q8NGE8 314 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 SLC37A2Q8TED4 501 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 GLYATL1Q969I3 302 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 SH3KBP1Q96B97 665 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 MRGPRX2Q96LB1 330 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 BBC3Q96PG8 261 aaPredicted RBP10.72□□□□□ -0.69
SSBP4-215ENST00000625926 PLEKHG4BQ96PX9 1271 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 SLC38A3Q99624 504 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 DPYSL5Q9BPU6 564 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 NUDT22Q9BRQ3 303 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 HERPUD2Q9BSE4 406 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 OR2AG1Q9H205 316 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 STN1Q9H668 368 aaKnown RBP10.72□□□□□ -0.69
SSBP4-215ENST00000625926 CPNE5Q9HCH3 593 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 ARFGAP3Q9NP61 516 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 HACD3Q9P035 362 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 TBC1D29Q9UFV1 150 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 ACSL6Q9UKU0 697 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 KCNK6Q9Y257 313 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 EFR3BQ9Y2G0 817 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 DUSP10Q9Y6W6 482 aa10.72□□□□□ -0.69
SSBP4-215ENST00000625926 IGHV5-10-1A0A0J9YXX1 117 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 HGSO14964 777 aaPredicted RBP10.71□□□□□ -0.69
SSBP4-215ENST00000625926 VEGFDO43915 354 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 SNX2O60749 519 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 EML2O95834 649 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 F3P13726 295 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 ITIH1P19827 911 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 HLA-DPA1P20036 260 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 RBL1P28749 1068 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 PPM1FP49593 454 aaPredicted RBP10.71□□□□□ -0.69
SSBP4-215ENST00000625926 CLCNKAP51800 687 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 VAV2P52735 878 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 LIMK2P53671 638 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 MAPK10P53779 464 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 RWDD2BP57060 319 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 HHEXQ03014 270 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 VAC14Q08AM6 782 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 CLN3Q13286 438 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 TRA2AQ13595 282 aaKnown RBP eCLIP10.71□□□□□ -0.69
SSBP4-215ENST00000625926 C16orf72Q14CZ0 275 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 NOMO1Q15155 1222 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 SLC1A5Q15758 541 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 SIRPB2Q5JXA9 342 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.71□□□□□ -0.69
SSBP4-215ENST00000625926 ARHGAP40Q5TG30 622 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 TMEM164Q5U3C3 297 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 ITPRIPL1Q6GPH6 555 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 TMEM71Q6P5X7 295 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 ADGRG6Q86SQ4 1221 aa10.71□□□□□ -0.69
SSBP4-215ENST00000625926 SLC9B2Q86UD5 537 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms