RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 PPP6CO00743 305 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 STX16O14662 325 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 ZNF821O75541 412 aaPredicted RBP19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 ACADSP16219 412 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 CHRM3P20309 590 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 EEF1DP29692 281 aaKnown RBP19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 NAA20P61599 178 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 ART3Q13508 389 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 PTK2BQ14289 1009 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 MAPRE2Q15555 327 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 BNC2Q6ZN30 1099 aaPredicted RBP19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 HMGCLL1Q8TB92 370 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 TTC1Q99614 292 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 C1QTNF3Q9BXJ4 246 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 ZFYVE1Q9HBF4 777 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 PRKAG2Q9UGJ0 569 aa19.57■□□□□ 0.72
PCDHB11-202ENST00000624887 CXorf51AA0A1B0GTR3 108 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 E5RI56 91 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 AZIN1O14977 448 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 GPR39O43194 453 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 IGSF6O95976 241 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 RPS17P08708 135 aaKnown RBP19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 CLCQ05315 142 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 LCP2Q13094 533 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 PPIGQ13427 754 aaKnown RBP eCLIP19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 KANK2Q63ZY3 851 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 ANKS6Q68DC2 871 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 UGT3A1Q6NUS8 523 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 GRIN3AQ8TCU5 1115 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 TRPC4APQ8TEL6 797 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 EEF1AKMT1Q8WVE0 214 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 LINGO1Q96FE5 620 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 LMLNQ96KR4 655 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 C3orf30Q96M34 536 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 ATP13A3Q9H7F0 1226 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 PCDHB1Q9Y5F3 818 aa19.56■□□□□ 0.72
PCDHB11-202ENST00000624887 ZBBXA8MT70 800 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 PSMD12O00232 456 aaPredicted RBP19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 PRMT5O14744 637 aaPredicted RBP19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 FGBP02675 491 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 CYBBP04839 570 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 GKP32189 559 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 ATP4BP51164 291 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 FASTKQ14296 549 aaKnown RBP19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 CDKN3Q16667 212 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 PIGGQ5H8A4 983 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 TXNDC11Q6PKC3 985 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 GK5Q6ZS86 529 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 SLC26A7Q8TE54 656 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 SLC22A17Q8WUG5 538 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 CDRT15Q96T59 188 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 WDR41Q9HAD4 459 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 UTP6Q9NYH9 597 aaKnown RBP19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 HELZP42694 1942 aaKnown RBP19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 C1orf232A0A0U1RR37 186 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 GAPDHSO14556 408 aaPredicted RBP19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 ENO3P13929 434 aaPredicted RBP19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 CLCN7P51798 805 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 STX5Q13190 355 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 DGKKQ5KSL6 1271 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 FAM219BQ5XKK7 198 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 CPNE9Q8IYJ1 553 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 OR2AP1Q8NGE2 309 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 TWIST2Q8WVJ9 160 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 PYDC1Q8WXC3 89 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 BADQ92934 168 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 NPAS2Q99743 824 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 EMILIN2Q9BXX0 1053 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 MRPL1Q9BYD6 325 aaKnown RBP19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 SMG9Q9H0W8 520 aaKnown RBP19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 TNKS2Q9H2K2 1166 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 TMCO1Q9UM00 188 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 DHRS7Q9Y394 339 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 IRAK3Q9Y616 596 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 SCN8AQ9UQD0 1980 aa19.55■□□□□ 0.72
PCDHB11-202ENST00000624887 ATP6AP2A0A1C7CYW4 349 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 CCL16O15467 120 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 MAP3K7O43318 606 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 ATP6AP2O75787 350 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 PRAMEF1O95521 474 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 BAG2O95816 211 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 GLUD1P00367 558 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 HNF1BP35680 557 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 CCR2P41597 374 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 FOXA1P55317 472 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 GEN1Q17RS7 908 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 ZNF423Q2M1K9 1284 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 EML3Q32P44 896 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 FAM151BQ6UXP7 276 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 CMTM8Q8IZV2 173 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 TCF25Q9BQ70 676 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 BATF3Q9NR55 127 aa19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 ZNF106Q9H2Y7 1883 aaKnown RBP19.54■□□□□ 0.72
PCDHB11-202ENST00000624887 CAPN8A6NHC0 703 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 GOLGA8CPA6NN73 597 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 IQCF5A8MTL0 148 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 BMP1P13497 986 aa19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 ZNF7P17097 686 aaPredicted RBP19.53■□□□□ 0.72
PCDHB11-202ENST00000624887 SERPINA4P29622 427 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms