RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 ERI2A8K979 691 aaKnown RBP12.4□□□□□ -0.42
LITAF-221ENST00000622633 GABRDO14764 452 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 CFLARO15519 480 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 SCO1O75880 301 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 MFN2O95140 757 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 ALAS2P22557 587 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 MAPK10P53779 464 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 SELPLGQ14242 412 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 SEL1L3Q68CR1 1132 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 IQSEC1Q6DN90 963 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 GPR142Q7Z601 462 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 ARMC8Q8IUR7 673 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 SLC41A1Q8IVJ1 513 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 DSELQ8IZU8 1212 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 CNTD1Q8N815 330 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 SPATA22Q8NHS9 363 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 MARC2Q969Z3 335 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 HDAC11Q96DB2 347 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 MARK4Q96L34 752 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 SENP8Q96LD8 212 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 CDRT15Q96T59 188 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 RHOBTB2Q9BYZ6 727 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 TKTL2Q9H0I9 626 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 ADNPQ9H2P0 1102 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 ABHD16BQ9H3Z7 469 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 WDCPQ9H6R7 721 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 OR12D3Q9UGF7 316 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 PCDHGA10Q9Y5H3 936 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 RAD54BQ9Y620 910 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 MRPL42Q9Y6G3 142 aaKnown RBP12.4□□□□□ -0.42
LITAF-221ENST00000622633 RALGAPA2Q2PPJ7 1873 aa12.4□□□□□ -0.42
LITAF-221ENST00000622633 MEIS3P2A8K0S8 358 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 H2AFYO75367 372 aaKnown RBP12.39□□□□□ -0.43
LITAF-221ENST00000622633 LRIG2O94898 1065 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 OLFM2O95897 454 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 AHSGP02765 367 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 GFAPP14136 432 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 GSTM2P28161 218 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 MRPS22P82650 360 aaKnown RBP12.39□□□□□ -0.43
LITAF-221ENST00000622633 ZNF33BQ06732 778 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 ZNF460Q14592 562 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 PCBP1Q15365 356 aaKnown RBP eCLIP12.39□□□□□ -0.43
LITAF-221ENST00000622633 LIPMQ5VYY2 423 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 SDE2Q6IQ49 451 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 FAM35AQ86V20 835 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 SPNS2Q8IVW8 549 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 CARNMT1Q8N4J0 409 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 TMEM102Q8N9M5 508 aaPredicted RBP12.39□□□□□ -0.43
LITAF-221ENST00000622633 KYQ8NBH2 561 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 GPR22Q99680 433 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 CPNE5Q9HCH3 593 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 HMG20AQ9NP66 347 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 RNF181Q9P0P0 153 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 HCN4Q9Y3Q4 1203 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 NUP205Q92621 2012 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 TRIM64A6NGJ6 449 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 BET1O15155 118 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 FGF18O76093 207 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 F2P00734 622 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 JUNP05412 331 aaKnown RBP12.39□□□□□ -0.43
LITAF-221ENST00000622633 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
LITAF-221ENST00000622633 AIF1P55008 147 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 PKNOX1P55347 436 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 GPR85P60893 370 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 SRP54P61011 504 aaKnown RBP12.39□□□□□ -0.43
LITAF-221ENST00000622633 TARDBPQ13148 414 aaKnown RBP eCLIP12.39□□□□□ -0.43
LITAF-221ENST00000622633 CTBP1Q13363 440 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 NFE2L1Q14494 772 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 PRPSAP1Q14558 356 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 CORO6Q6QEF8 472 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 ARHGAP36Q6ZRI8 547 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 DENND6AQ8IWF6 608 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 CDC26Q8NHZ8 85 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 ZSCAN18Q8TBC5 510 aaPredicted RBP12.39□□□□□ -0.43
LITAF-221ENST00000622633 RCN3Q96D15 328 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 CCDC120Q96HB5 630 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 TSNARE1Q96NA8 513 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 WDR12Q9GZL7 423 aaKnown RBP12.39□□□□□ -0.43
LITAF-221ENST00000622633 RHOJQ9H4E5 214 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 CPNE7Q9UBL6 633 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 ATP6V1HQ9UI12 483 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 ZNF229Q9UJW7 825 aa12.39□□□□□ -0.43
LITAF-221ENST00000622633 PTBP2Q9UKA9 531 aaKnown RBP12.39□□□□□ -0.43
LITAF-221ENST00000622633 C9IYK1 514 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 DFFAO00273 331 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 CABYRO75952 493 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 KRT8P05787 483 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 APOA4P06727 396 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 SLC35E2BP0CK96 405 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 LRPAP1P30533 357 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 ATXN3P54252 364 aaPredicted RBP12.38□□□□□ -0.43
LITAF-221ENST00000622633 PRKAA2P54646 552 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 MPP1Q00013 466 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 CDH17Q12864 832 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 MFSD10Q14728 455 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 MGAT5BQ3V5L5 792 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 LEXMQ3ZCV2 418 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 C11orf96Q7Z7L8 435 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 FSTL5Q8N475 847 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms