RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CACNA1IQ9P0X4 2223 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 PRRC2CQ9Y520 2896 aaKnown RBP10.46□□□□□ -0.74
VPS11-208ENST00000621676 WASH4PA8MWX3 477 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 G3V2L1 256 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 SBK3P0C264 359 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 POLD2P49005 469 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 ABCE1P61221 599 aaKnown RBP10.46□□□□□ -0.74
VPS11-208ENST00000621676 KHDC1Q4VXA5 237 aaKnown RBP10.46□□□□□ -0.74
VPS11-208ENST00000621676 CARD16Q5EG05 197 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 RALGPS1Q5JS13 557 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 UBE2Q1Q7Z7E8 422 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 TRAPPC5Q8IUR0 188 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 CCNJLQ8IV13 435 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 C2CD4AQ8NCU7 369 aaPredicted RBP10.46□□□□□ -0.74
VPS11-208ENST00000621676 CLHC1Q8NHS4 586 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 RLN3Q8WXF3 142 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 FEM1CQ96JP0 617 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 SLC39A3Q9BRY0 314 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 NSUN3Q9H649 340 aaKnown RBP10.46□□□□□ -0.74
VPS11-208ENST00000621676 EIF2B4Q9UI10 523 aaKnown RBP10.46□□□□□ -0.74
VPS11-208ENST00000621676 ERVW-1Q9UQF0 538 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 OR1A2Q9Y585 309 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 V9GYQ6 96 aa10.46□□□□□ -0.74
VPS11-208ENST00000621676 MIA3Q5JRA6 1907 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 A0A1W2PP55 124 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 STX16-NPEPL1H3BU86 382 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 CR2P20023 1033 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 IL12RB1P42701 662 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 SLC7A9P82251 487 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 SPDYAQ5MJ70 313 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 KIAA0930Q6ICG6 404 aaPredicted RBP10.45□□□□□ -0.74
VPS11-208ENST00000621676 KLC3Q6P597 504 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 KLHDC10Q6PID8 442 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 IFNEQ86WN2 208 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 TEX26Q8N6G2 289 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 PIWIL2Q8TC59 973 aaKnown RBP10.45□□□□□ -0.74
VPS11-208ENST00000621676 MTBPQ96DY7 904 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 PLAGL1Q9UM63 463 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 APOBEC2Q9Y235 224 aaKnown RBP10.45□□□□□ -0.74
VPS11-208ENST00000621676 USH1CQ9Y6N9 552 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 PIKFYVEQ9Y2I7 2098 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 PSMD3O43242 534 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 SNX2O60749 519 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 ENTPD5O75356 428 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 EEF1DP29692 281 aaKnown RBP10.45□□□□□ -0.74
VPS11-208ENST00000621676 PTSQ03393 145 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 ASPHQ12797 758 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 DBN1Q16643 649 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 ACSBG2Q5FVE4 666 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 RAET1GQ6H3X3 334 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 C10orf82Q8WW14 230 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 SUSD6Q92537 303 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 SMARCD2Q92925 531 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 MCUR1Q96AQ8 359 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 KCNK13Q9HB14 408 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 CD248Q9HCU0 757 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 TM7SF3Q9NS93 570 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 TAS2R13Q9NYV9 303 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 SERGEFQ9UGK8 458 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 ZNF180Q9UJW8 692 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.45□□□□□ -0.74
VPS11-208ENST00000621676 ASXL3Q9C0F0 2248 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 A0A0J9YYE9 177 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 GPC4O75487 556 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 TRBC1P01850 177 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 DLDP09622 509 aaKnown RBP10.45□□□□□ -0.74
VPS11-208ENST00000621676 ELFN1P0C7U0 828 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 ENO3P13929 434 aaPredicted RBP10.45□□□□□ -0.74
VPS11-208ENST00000621676 NEK2P51955 445 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 ZNF135P52742 658 aaPredicted RBP10.45□□□□□ -0.74
VPS11-208ENST00000621676 STC1P52823 247 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 PKNOX1P55347 436 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 ZNF234Q14588 700 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 CCDC6Q16204 474 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 CPSF6Q16630 551 aaKnown RBP eCLIP10.45□□□□□ -0.74
VPS11-208ENST00000621676 VITQ6UXI7 678 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 VRK3Q8IV63 474 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 OR52B6Q8NGF0 335 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 GIMAP7Q8NHV1 300 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 STYXQ8WUJ0 223 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 MED8Q96G25 268 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 ASB16Q96NS5 453 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 TRIB3Q96RU7 358 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 FAM167BQ9BTA0 163 aa10.45□□□□□ -0.74
VPS11-208ENST00000621676 BDP1A6H8Y1 2624 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 A8MT66 165 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 TBX10O75333 385 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 PCCBP05166 539 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 ATP5BP06576 529 aaKnown RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 LTA4HP09960 611 aaKnown RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 PKMP14618 531 aaKnown RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 HNF4AP41235 474 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 YBX1P67809 324 aaKnown RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 OCRLQ01968 901 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 MSLNQ13421 630 aaPredicted RBP10.44□□□□□ -0.74
VPS11-208ENST00000621676 AGAP9Q5VTM2 703 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 GDPD4Q6W3E5 623 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 MAVSQ7Z434 540 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 CLNKQ7Z7G1 428 aa10.44□□□□□ -0.74
VPS11-208ENST00000621676 LONP2Q86WA8 852 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms