RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 A0A0U1RQF3 1178 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 KCNA5P22460 613 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ME2P23368 584 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 CCNCP24863 283 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 IL12BP29460 328 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 UGT1A5P35504 534 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 NDST2P52849 883 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 VPS26BQ4G0F5 336 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 LDLRAP1Q5SW96 308 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 MBLAC2Q68D91 279 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 DUPD1Q68J44 220 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 CYP2R1Q6VVX0 501 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 GRASPQ7Z6J2 395 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 GALNT7Q86SF2 657 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 CIR1Q86X95 450 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 IZUMO1Q8IYV9 350 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 PMEPA1Q969W9 287 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ZHX1-C8orf76Q96EF9 292 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ZNF514Q96K75 400 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 RAB11FIP5Q9BXF6 653 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 HDHD2Q9H0R4 259 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 TRPS1Q9UHF7 1281 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 COG5Q9UP83 839 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 TPRKBQ9Y3C4 175 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 TRAFD1O14545 582 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 RFXANKO14593 260 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 OR1F1O43749 312 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 L1CAMP32004 1257 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 GRIA4P48058 902 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ACTR3P61158 418 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 RHAGQ02094 409 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 COX10Q12887 443 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ELOAQ14241 798 aaKnown RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 GRB14Q14449 540 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 HECTD2Q5U5R9 776 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 RTL4Q6ZR62 310 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 AHI1Q8N157 1196 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 UBR7Q8N806 425 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 FAM46DQ8NEK8 389 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 DNASE1L2Q92874 299 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 PNPLA8Q9NP80 782 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 TDP1Q9NUW8 608 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 OSER1Q9NX31 292 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 ARMCX1Q9P291 453 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 FBXW2Q9UKT8 454 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 MTF2Q9Y483 593 aaPredicted RBP9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 TLL2Q9Y6L7 1015 aa9.74□□□□□ -0.85
CLTCL1-211ENST00000621271 NHSL1Q5SYE7 1610 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 IRAK2O43187 625 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 WFS1O76024 890 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 NDUFS1P28331 727 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 ST13P50502 369 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 DSC2Q02487 901 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 ARHGAP1Q07960 439 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 LACTB2Q53H82 288 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 CPTPQ5TA50 214 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC25A24Q6NUK1 477 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 HDDC2Q7Z4H3 204 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 AMZ2Q86W34 360 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 XYLT1Q86Y38 959 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 ZNF276Q8N554 614 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 AADATQ8N5Z0 425 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC43A3Q8NBI5 491 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 NPLOC4Q8TAT6 608 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 LNX1Q8TBB1 728 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC22A18Q96BI1 424 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 ITCHQ96J02 903 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 ACE2Q9BYF1 805 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 DPEP3Q9H4B8 488 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 KCNK4Q9NYG8 393 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 SHPRHQ149N8 1683 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 VIRMAQ69YN4 1812 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 BAZ2BQ9UIF8 2168 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 AZIN1O14977 448 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 PLGP00747 810 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 ITGA2BP08514 1039 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 JMJD7P0C870 316 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 PIM1P11309 404 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 TSHRP16473 764 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 TSPAN8P19075 237 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC6A2P23975 617 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 IDH2P48735 452 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC13A2Q13183 592 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 LPIN1Q14693 890 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 QPCTQ16769 361 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 ZFP1Q6P2D0 407 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 RNF148Q8N7C7 305 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 FBXO15Q8NCQ5 510 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC9A6Q92581 669 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 NUS1Q96E22 293 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 PRICKLE1Q96MT3 831 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 GKN1Q9NS71 199 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 XPR1Q9UBH6 696 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 VSTM5A8MXK1 200 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 ABLIM1O14639 778 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 GMFGO60234 142 aa9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 WBP4O75554 376 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-211ENST00000621271 STK16O75716 305 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms