RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CNGA3Q16281 694 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 CLEC16AQ2KHT3 1053 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 DEFB109BQ30KR1 87 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 FKBP15Q5T1M5 1219 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 C16orf46Q6P387 395 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 CLEC18BQ6UXF7 455 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 CEACAM20Q6UY09 585 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 RFX8Q6ZV50 586 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 MON1BQ7L1V2 547 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 KIAA1328Q86T90 577 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 ATCAYQ86WG3 371 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 PHF13Q86YI8 300 aaPredicted RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 TXLNBQ8N3L3 684 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 MMGT1Q8N4V1 131 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 BMPERQ8N8U9 685 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 CLEC18CQ8NCF0 446 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 NEK11Q8NG66 645 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 DTD2Q96FN9 168 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 PSMG3-AS1Q96PY0 264 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 OR2M4Q96R27 311 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 PCDHB18PQ96TA0 734 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 ZPBPQ9BS86 351 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 TSGA10Q9BZW7 698 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 DHX35Q9H5Z1 703 aaKnown RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 ZNHIT6Q9NWK9 470 aaKnown RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 GPATCH2LQ9NWQ4 482 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 SNX12Q9UMY4 172 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 SLC17A4Q9Y2C5 497 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 PCDHGC4Q9Y5F7 938 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 PCDHA13Q9Y5I0 950 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 CREBBPQ92793 2442 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 TRBV23OR9-2A0A075B6M9 112 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 LOC101059948A0A1B0GTJ6 334 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 A0A1W2PQ67 120 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 TTC24A2A3L6 582 aaPredicted RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 ZNF185O15231 689 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 SOCS5O75159 536 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 STK17BO94768 372 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 HEXIM1O94992 359 aaKnown RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 SYF2O95926 243 aaKnown RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 CPP00450 1065 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 IVLP07476 585 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 CYP2A6P11509 494 aaPredicted RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 ERCC2P18074 760 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 TCN2P20062 427 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 VIPR1P32241 457 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 GPR1P46091 355 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 JAM2P57087 298 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 HHEXQ03014 270 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 CKAP4Q07065 602 aaKnown RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 IL10RBQ08334 325 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 ABHD18Q0P651 414 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 ZNF235Q14590 738 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 LBRQ14739 615 aaKnown RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 PPP6R3Q5H9R7 873 aaPredicted RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 TMCO4Q5TGY1 634 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 WDR74Q6RFH5 385 aaPredicted RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 ARHGAP36Q6ZRI8 547 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 Q6ZVL8 140 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 MARK2Q7KZI7 788 aaKnown RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 HSD11B1LQ7Z5J1 315 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 NPWQ8N729 165 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 TEX19Q8NA77 164 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 SLC37A2Q8TED4 501 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 NCSTNQ92542 709 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 SYN2Q92777 582 aaPredicted RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 PSKH2Q96QS6 385 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 TRIT1Q9H3H1 467 aaKnown RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 STN1Q9H668 368 aaKnown RBP7.78□□□□□ -1.16
CLK1-215ENST00000621181 TP53TG5Q9Y2B4 290 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 PCDHB3Q9Y5E6 796 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 CAPN6Q9Y6Q1 641 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 MYO9AB2RTY4 2548 aa7.78□□□□□ -1.16
CLK1-215ENST00000621181 SSU72P8A0A1W2PR75 194 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 ERICH4A6NGS2 130 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 NPIPB15A6NHN6 443 aaPredicted RBP7.77□□□□□ -1.17
CLK1-215ENST00000621181 MKRN2OSH3BPM6 223 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 PSMD11O00231 422 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 POLR1CO15160 346 aaPredicted RBP7.77□□□□□ -1.17
CLK1-215ENST00000621181 MTSS1O43312 755 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 HTRA2O43464 458 aaPredicted RBP7.77□□□□□ -1.17
CLK1-215ENST00000621181 MAP3K6O95382 1288 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 MYBL2P10244 700 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 LHCGRP22888 699 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 PSMA2P25787 234 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 MAPK9P45984 424 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 MC2RQ01718 297 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 SLC10A7Q0GE19 358 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 KIF5AQ12840 1032 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 KLRB1Q12918 225 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 LRP8Q14114 963 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 ERMARDQ5T6L9 678 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 ATP1A1-AS1Q5TC04 95 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 USP45Q70EL2 814 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 TIPARPQ7Z3E1 657 aaKnown RBP7.77□□□□□ -1.17
CLK1-215ENST00000621181 TRIM74Q86UV6 250 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 GALNT13Q8IUC8 556 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 ARHGAP12Q8IWW6 846 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 SFRP1Q8N474 314 aa7.77□□□□□ -1.17
CLK1-215ENST00000621181 LZTR1Q8N653 840 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms