RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 FAM192AQ9GZU8 254 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 EXO5Q9H790 373 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 MRPL40Q9NQ50 206 aaKnown RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 EIF2B3Q9NR50 452 aaKnown RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 LIMD1Q9UGP4 676 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 AK5Q9Y6K8 562 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 CACNA1BQ00975 2339 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 H3BN98 237 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 LDB2O43679 373 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 PEX1O43933 1283 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 TBC1D4O60343 1298 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 AP2A1O95782 977 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 SLC35G4P0C7Q5 338 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 THRAP10827 490 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 NMBRP28336 390 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 AQP1P29972 269 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 TIE1P35590 1138 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 FOLH1Q04609 750 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 SRSF11Q05519 484 aaKnown RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 CYLC2Q14093 348 aaPredicted RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 ARL13AQ5H913 290 aaPredicted RBP8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 RNF111Q6ZNA4 994 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 CYS1Q717R9 158 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 ZBTB46Q86UZ6 589 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 NPAS4Q8IUM7 802 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 SYT12Q8IV01 421 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 HID1Q8IV36 788 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 KYQ8NBH2 561 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 ZNF555Q8NEP9 628 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 DNAJB14Q8TBM8 379 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 HERVK_113Q902F9 699 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 ABCB8Q9NUT2 735 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 VPS51Q9UID3 782 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 GJD2Q9UKL4 321 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 ANGPT4Q9Y264 503 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 USP3Q9Y6I4 520 aa8.24□□□□□ -1.09
PTPDC1-204ENST00000620992 UNCXA6NJT0 531 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 ZNF487B1APH4 448 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 STATHP02808 62 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 MPOP05164 745 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 CYP2A6P11509 494 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 MC4RP32245 332 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 SF1Q15637 639 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 CNPY1Q3B7I2 92 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 LSM12Q3MHD2 195 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 TAPT1Q6NXT6 567 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 EPGNQ6UW88 154 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 FAM180AQ6UWF9 173 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 BNC2Q6ZN30 1099 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 SAPCD2Q86UD0 394 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 NRSN1Q8IZ57 195 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 CRYBG2Q8N1P7 616 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 PSMG2Q969U7 264 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 EQTNQ9NQ60 294 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 POLR1DQ9Y2S0 133 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 DAB1O75553 588 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 ALBP02768 609 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 RPL14P50914 215 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 SOX4Q06945 474 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 EPS8Q12929 822 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 PPIGQ13427 754 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 C16orf89Q6UX73 402 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 PLEKHM3Q6ZWE6 761 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 CHST9Q7L1S5 443 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 GRASPQ7Z6J2 395 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 TAC4Q86UU9 113 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 OSTM1Q86WC4 334 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 CMTM8Q8IZV2 173 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 FAM156AQ8NDB6 213 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 CYB5D2Q8WUJ1 264 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 PMEPA1Q969W9 287 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 THAP11Q96EK4 314 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 PPP1R16AQ96I34 528 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 RNF145Q96MT1 663 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 FERD3LQ96RJ6 166 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 C11orf84Q9BUA3 381 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 KLHL25Q9H0H3 589 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 OSER1Q9NX31 292 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 DUS2Q9NX74 493 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 RNF186Q9NXI6 227 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 IGSF9Q9P2J2 1179 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 RCOR3Q9P2K3 495 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 WNT6Q9Y6F9 365 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 OR6C75A6NL08 312 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 STX16-NPEPL1H3BU86 382 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 HDAC3O15379 428 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 FGFR3P22607 806 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 GDI1P31150 447 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 NRIP1P48552 1158 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 POLD2P49005 469 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 KCNQ1P51787 676 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 MARCH8Q5T0T0 291 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 FAAH2Q6GMR7 532 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 DNAJB7Q7Z6W7 309 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 ZNF598Q86UK7 904 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 SATL1Q86VE3 508 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 COMMD2Q86X83 199 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 DSELQ8IZU8 1212 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 NPWQ8N729 165 aa8.23□□□□□ -1.09
PTPDC1-204ENST00000620992 TSSK3Q96PN8 268 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms