RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MARSP56192 900 aaKnown RBP7.14□□□□□ -1.27
COLCA1-205ENST00000620864 MBTD1Q05BQ5 628 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 CRY1Q16526 586 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 ZIK1Q3SY52 487 aaPredicted RBP7.14□□□□□ -1.27
COLCA1-205ENST00000620864 ATG9AQ7Z3C6 839 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 TESCQ96BS2 214 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 ITPKCQ96DU7 683 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 SPATC1LQ9H0A9 340 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 RSPH9Q9H1X1 276 aaPredicted RBP7.14□□□□□ -1.27
COLCA1-205ENST00000620864 EHD4Q9H223 541 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 TM9SF3Q9HD45 589 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 KLK14Q9P0G3 267 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 FRMPD1Q5SYB0 1578 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 CENPBD1B2RD01 187 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 H6PDO95479 791 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 ALDH2P05091 517 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 CYP11B2P19099 503 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 ALDH4A1P30038 563 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 FLT3LGP49771 235 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 KCNJ2P63252 427 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 FKBP1BP68106 108 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 CTXN3Q4LDR2 81 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 PRAMEF17Q5VTA0 474 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 RAB12Q6IQ22 244 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 JAZF1Q86VZ6 243 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 SLAIN1Q8ND83 568 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 DPAGT1Q9H3H5 408 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 UBQLN2Q9UHD9 624 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 PTBP2Q9UKA9 531 aaKnown RBP7.14□□□□□ -1.27
COLCA1-205ENST00000620864 PRR12Q9ULL5 1215 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 C2orf71A6NGG8 1288 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 PPM1BO75688 479 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 IGSF6O95976 241 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 PNLIPRP1P54315 467 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 DCDC1P59894 354 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF543Q08ER8 600 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 STXBP5Q5T5C0 1151 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 GCNT7Q6ZNI0 430 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 LRRC70Q7Z2Q7 622 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 MIB1Q86YT6 1006 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 SPERTQ8NA61 448 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 CDHR5Q9HBB8 845 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 ARL15Q9NXU5 204 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 RDH8Q9NYR8 311 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 KIDINS220Q9ULH0 1771 aa7.14□□□□□ -1.27
COLCA1-205ENST00000620864 JCHAINP01591 159 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 AMD1P17707 334 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 SERPINA4P29622 427 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 MMP13P45452 471 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 RPS9P46781 194 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 BMPR2Q13873 1038 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 GRIK4Q16099 956 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 GLT6D1Q7Z4J2 308 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 PTAR1Q7Z6K3 402 aaPredicted RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 MXRA8Q9BRK3 442 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 TREM1Q9NP99 234 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 RBM22Q9NW64 420 aaKnown RBP eCLIP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 TULP2O00295 520 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 MSH4O15457 936 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 GSC2O15499 205 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 AVILO75366 819 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CABYRO75952 493 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CCNHP51946 323 aaPredicted RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CEBPGP53567 150 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 FAAP100Q0VG06 881 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 COL9A3Q14050 684 aaPredicted RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 TEAD4Q15561 434 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 PABPC1LQ4VXU2 614 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF484Q5JVG2 852 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF517Q6ZMY9 492 aaPredicted RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 USP45Q70EL2 814 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 MCOLN2Q8IZK6 566 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 RASGEF1AQ8N9B8 481 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 TMEM176AQ96HP8 235 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 GPER1Q99527 375 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 TTLL2Q9BWV7 592 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 NT5MQ9NPB1 228 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CALML5Q9NZT1 146 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 NYAP2Q9P242 653 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 MTRRQ9UBK8 725 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 BCORL1Q5H9F3 1711 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF99A8MXY4 864 aaPredicted RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 RAMP2O60895 175 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 FGBP02675 491 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 UGT2B4P06133 528 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 HSD3B1P14060 373 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 MTHFRP42898 656 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 GDI2P50395 445 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CYP4F2P78329 520 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 IFI35P80217 286 aaPredicted RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 SLC25A3Q00325 362 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CYP4F3Q08477 520 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ADAM15Q13444 863 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 USP41Q3LFD5 358 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 FNDC3BQ53EP0 1204 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 ADGRG6Q86SQ4 1221 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 CYP4X1Q8N118 509 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 LINC00471Q8N535 108 aa7.13□□□□□ -1.27
COLCA1-205ENST00000620864 PCDH20Q8N6Y1 951 aaKnown RBP7.13□□□□□ -1.27
COLCA1-205ENST00000620864 FAM98AQ8NCA5 519 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms