RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CAPGP40121 348 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 SERPINB10P48595 397 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 LHX1P48742 406 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 LIPEQ05469 1076 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 TRAP1Q12931 704 aaKnown RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 GRB14Q14449 540 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 MOGQ16653 247 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 WSCD1Q658N2 575 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 NANOGNBQ7Z5D8 188 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 R3HCC1LQ7Z5L2 792 aaKnown RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 GANCQ8TET4 914 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 HTRA1Q92743 480 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 CASP10Q92851 521 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 SLC35B4Q969S0 331 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 PPP1R14BQ96C90 147 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 LRRC58Q96CX6 371 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 YME1L1Q96TA2 773 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 CSF3RQ99062 836 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ACOX2Q99424 681 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 TBL1YQ9BQ87 522 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 C11orf84Q9BUA3 381 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 CATSPERBQ9H7T0 1116 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ITM2CQ9NQX7 267 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ST3GAL5Q9UNP4 418 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 KCTD3Q9Y597 815 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 NRXN2Q9P2S2 1712 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 IGKV6-21A0A0C4DH24 114 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 UBXN8O00124 270 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 AP3B1O00203 1094 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 STX7O15400 261 aaKnown RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 RGS5O15539 181 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 TSPAN1O60635 241 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ARHGAP1Q07960 439 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 DMPKQ09013 629 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 SPCS2Q15005 226 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 AASDHQ4L235 1098 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 PCID2Q5JVF3 399 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 OTUD1Q5VV17 481 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 GPRIN1Q7Z2K8 1008 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ZDHHC17Q8IUH5 632 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 PTGR2Q8N8N7 351 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 B3GALNT2Q8NCR0 500 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 TRPV3Q8NET8 790 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 NPLOC4Q8TAT6 608 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 FBXO30Q8TB52 745 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 RAD21L1Q9H4I0 556 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 ALG2Q9H553 416 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 AGPAT4Q9NRZ5 378 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 INTS7Q9NVH2 962 aaKnown RBP6.92□□□□□ -1.3
NEDD9-216ENST00000620854 NSMCE4AQ9NXX6 385 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 MPP6Q9NZW5 540 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 POU2F3Q9UKI9 436 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 RNF112Q9ULX5 631 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 WDR37Q9Y2I8 494 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 LTBP1Q14766 1721 aa6.92□□□□□ -1.3
NEDD9-216ENST00000620854 C22orf31O95567 290 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SERPIND1P05546 499 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 KRT8P05787 483 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 LTA4HP09960 611 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 HIST1H2AGP0C0S8 130 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 DARSP14868 501 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 HIST1H2ADP20671 130 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 AGXTP21549 392 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CCR1P32246 355 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SHMT2P34897 504 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 GSK3BP49841 420 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SEPHS1P49903 392 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CCT8P50990 548 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 PRMT2P55345 433 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TPTEP56180 551 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 NRG1Q02297 640 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CHRNB3Q05901 458 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ELAVL2Q12926 359 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 LAPTM4AQ15012 233 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 KCNA10Q16322 511 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 AAK1Q2M2I8 961 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 UGT3A2Q3SY77 523 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 PAGE3Q5JUK9 113 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 KCTD11Q693B1 232 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 CYHR1Q6ZMK1 362 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 DSG4Q86SJ6 1040 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 LINC00523Q86TU6 105 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SLC44A2Q8IWA5 706 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ADGRG5Q8IZF4 528 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ANKRD31Q8N7Z5 1873 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 OR9Q1Q8NGQ5 310 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 GLMNQ92990 594 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ISL2Q96A47 359 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SH3KBP1Q96B97 665 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ZNF419Q96HQ0 510 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 MAELQ96JY0 434 aaKnown RBP6.91□□□□□ -1.3
NEDD9-216ENST00000620854 HIST1H2AHQ96KK5 128 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 HIST1H2AJQ99878 128 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 SGIP1Q9BQI5 828 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 H2AFJQ9BTM1 129 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TBCDQ9BTW9 1192 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 ZNHIT2Q9UHR6 403 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 FAM50BQ9Y247 325 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 TCAF1Q9Y4C2 921 aa6.91□□□□□ -1.3
NEDD9-216ENST00000620854 GPC6Q9Y625 555 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms