RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 ZDHHC13Q8IUH4 622 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 UTP15Q8TED0 518 aaKnown RBP12.21□□□□□ -0.46
MATR3-227ENST00000618441 SLC39A13Q96H72 371 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 FAM126AQ9BYI3 521 aaPredicted RBP12.21□□□□□ -0.46
MATR3-227ENST00000618441 PRM3Q9NNZ6 103 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 CCM2LQ9NUG4 571 aaPredicted RBP12.21□□□□□ -0.46
MATR3-227ENST00000618441 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.21□□□□□ -0.46
MATR3-227ENST00000618441 PCDHA11Q9Y5I1 949 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 TCRBV3S1A0A5B6 114 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 DDTLA6NHG4 134 aaPredicted RBP12.2□□□□□ -0.46
MATR3-227ENST00000618441 RASAL1O95294 804 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 PDGFAP04085 211 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 CYP2A7P20853 494 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 SPRP35270 261 aaPredicted RBP12.2□□□□□ -0.46
MATR3-227ENST00000618441 SLC15A1P46059 708 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 PRELPP51888 382 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 MLLT6P55198 1093 aaPredicted RBP12.2□□□□□ -0.46
MATR3-227ENST00000618441 NFYCQ13952 458 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 C6orf132Q5T0Z8 1188 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 ARHGAP36Q6ZRI8 547 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 MFSD2AQ8NA29 543 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 VANGL1Q8TAA9 524 aaPredicted RBP12.2□□□□□ -0.46
MATR3-227ENST00000618441 RIBC2Q9H4K1 309 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 AFF4Q9UHB7 1163 aaKnown RBP12.2□□□□□ -0.46
MATR3-227ENST00000618441 TBX20Q9UMR3 447 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 USP18Q9UMW8 372 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 FAM221BA6H8Z2 402 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 ARPC2O15144 300 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 GRID2O43424 1007 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 SCGB1D2O95969 90 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 TSHRP16473 764 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 CRHBPP24387 322 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 GSTM2P28161 218 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 HTR3AP46098 478 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 GRM7Q14831 915 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 POU4F3Q15319 338 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 RAB6CQ53S08 254 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 OR6B2Q6IFH4 312 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 FAM180BQ6P0A1 224 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 SLC16A12Q6ZSM3 486 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 EID3Q8N140 333 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 RDM1Q8NG50 284 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 TRPM4Q8TD43 1214 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 SLC22A17Q8WUG5 538 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 CHCHD6Q9BRQ6 235 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 RAB6CQ9H0N0 254 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 ERVMER34-1Q9H9K5 563 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 C12orf10Q9HB07 376 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 USP22Q9UPT9 525 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 ORC6Q9Y5N6 252 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 FAM159BA6NKW6 160 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 TPH1P17752 444 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 PBLDP30039 288 aaPredicted RBP12.2□□□□□ -0.46
MATR3-227ENST00000618441 GP5P40197 560 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 GP2P55259 537 aaKnown RBP12.2□□□□□ -0.46
MATR3-227ENST00000618441 CREB5Q02930 508 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 GBE1Q04446 702 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 PPIL2Q13356 520 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 CUL2Q13617 745 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 CTF1Q16619 201 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 SOWAHCQ53LP3 525 aaPredicted RBP12.2□□□□□ -0.46
MATR3-227ENST00000618441 GTF2IRD2BQ6EKJ0 949 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 KLHL17Q6TDP4 642 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 GTF2IRD2Q86UP8 949 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 BEST2Q8NFU1 509 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 ZNF566Q969W8 418 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 SLC25A23Q9BV35 468 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 GLTPQ9NZD2 209 aa12.2□□□□□ -0.46
MATR3-227ENST00000618441 FAM155AB1AL88 458 aaPredicted RBP12.19□□□□□ -0.46
MATR3-227ENST00000618441 FAM20BO75063 409 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 ANGPTL1O95841 491 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 CYP3A5P20815 502 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 KCNA5P22460 613 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 CD47Q08722 323 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 KRR1Q13601 381 aaKnown RBP12.19□□□□□ -0.46
MATR3-227ENST00000618441 ATP6AP1Q15904 470 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 BRMS1LQ5PSV4 323 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 TRPV3Q8NET8 790 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 URGCPQ8TCY9 931 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 TMEM74Q96NL1 305 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
MATR3-227ENST00000618441 HDHD5Q9BXW7 423 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 CFL2Q9Y281 166 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 UBR2Q8IWV8 1755 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 A0A1W2PRG6 482 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 WWP2O00308 870 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 PDHXO00330 501 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 AIREO43918 545 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 CYP2A6P11509 494 aaPredicted RBP12.19□□□□□ -0.46
MATR3-227ENST00000618441 PRIM2P49643 509 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 FAM83EQ2M2I3 478 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 CCDC14Q49A88 953 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 ESCO2Q56NI9 601 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 HEATR6Q6AI08 1181 aaKnown RBP12.19□□□□□ -0.46
MATR3-227ENST00000618441 ZNF598Q86UK7 904 aaKnown RBP12.19□□□□□ -0.46
MATR3-227ENST00000618441 SLC9A9Q8IVB4 645 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 PARP16Q8N5Y8 322 aa12.19□□□□□ -0.46
MATR3-227ENST00000618441 ZBTB44Q8NCP5 570 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms