RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 HMGXB4Q9UGU5 601 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 MPZL2O60487 215 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 MMP3P08254 477 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 ATXN1P54253 815 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 MAPK14Q16539 360 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 MINDY4Q4G0A6 757 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 VPS26BQ4G0F5 336 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CFAP206Q8IYR0 622 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 UNC5BQ8IZJ1 945 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CKAP2Q8WWK9 683 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CDH7Q9ULB5 785 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 NCANO14594 1321 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 SPATA31C2B4DYI2 1134 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 IRF6O14896 467 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 DNAJA2O60884 412 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 RPP40O75818 363 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 S100A1P23297 94 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 MTHFRP42898 656 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 POC5Q8NA72 575 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 BAP1Q92560 729 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 GSDMCQ9BYG8 508 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 LRTM1Q9HBL6 345 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CHST7Q9NS84 486 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 ANKRD63C9JTQ0 380 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 EPHX1P07099 455 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 ERCC2P18074 760 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CDK9P50750 372 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CACNG1Q06432 222 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 RGMBQ6NW40 437 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 ARHGAP22Q7Z5H3 698 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC43A3Q8NBI5 491 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 MIOSQ9NXC5 875 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 UPB1Q9UBR1 384 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 RGPD8O14715 1765 aaPredicted RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 TRIM3O75382 744 aaPredicted RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 S100A6P06703 90 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CTSKP43235 329 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 DLG4P78352 724 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 DPYSQ14117 519 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 UBAP2LQ14157 1087 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 GPALPP1Q8IXQ4 340 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 AENQ8WTP8 325 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 MKL1Q969V6 931 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 FCRL2Q96LA5 508 aaPredicted RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 TLR10Q9BXR5 811 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 WBP11Q9Y2W2 641 aaKnown RBP11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 VWA7Q9Y334 891 aa11.11□□□□□ -0.63
CCDC144B-208ENST00000618081 CAPN14A8MX76 684 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 DHFRP00374 187 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 CTBP1Q13363 440 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 ITGA7Q13683 1181 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 PDK4Q16654 411 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 GCNT6Q5T4J0 391 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 PPP1R26Q5T8A7 1209 aaPredicted RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 LCN1P1Q5VSP4 162 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 THOC7Q6I9Y2 204 aaKnown RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 OR4C6Q8NH72 309 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 HBS1LQ9Y450 684 aaKnown RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 TRAF6Q9Y4K3 522 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 ABCG1P45844 678 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 DNASE1L1P49184 302 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 C10orf107Q8IVU9 208 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 TAPBPLQ9BX59 468 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 PRDM12Q9H4Q4 367 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 IL1RAPQ9NPH3 570 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 A0A1W2PQH9 124 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 FADS2P1A8MWK0 482 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 PSMA1P25786 263 aaKnown RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 PNLIPRP1P54315 467 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 RGS8P57771 180 aaPredicted RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 KCNA10Q16322 511 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 QSOX2Q6ZRP7 698 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 KBTBD2Q8IY47 623 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 RHOJQ9H4E5 214 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 FANCFQ9NPI8 374 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 FAM237BA0A1B0GVD1 139 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 TPD52L2O43399 206 aaKnown RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 APOC1P02654 83 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 MAPK12P53778 367 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 CASP9P55211 416 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 SP2Q02086 613 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 ATG14Q6ZNE5 492 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 FAM129CQ86XR2 697 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC34A3Q8N130 599 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 ZBTB2Q8N680 514 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 SGCDQ92629 289 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 POLMQ9NP87 494 aaPredicted RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 PRKAB1Q9Y478 270 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 OAS3Q9Y6K5 1087 aaKnown RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 VSTM5A8MXK1 200 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 PAPSS2O95340 614 aaPredicted RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 FAM153BP0C7A2 387 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 TSPAN8P19075 237 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 SNAPC1Q16533 368 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 CERS6Q6ZMG9 384 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 STRADAQ7RTN6 431 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 MRIQ9BWK5 157 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 RNPEPL1Q9HAU8 725 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 EFR3BQ9Y2G0 817 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms