RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 SMG5Q9UPR3 1016 aaKnown RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 RBM47A0AV96 593 aaKnown RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 GSNP06396 782 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 HYAL2Q12891 473 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 ANGPT1Q15389 498 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 TSSK4Q6SA08 328 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 TMEM132CQ8N3T6 1108 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 FBXO36Q8NEA4 188 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 KCNE4Q8WWG9 221 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 MYCBPQ99417 103 aaPredicted RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 CFAP20Q9Y6A4 193 aaKnown RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 TRIM49D1C9J1S8 452 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 SIN3BO75182 1162 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 POP7O75817 140 aaKnown RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 ITPKAP23677 461 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 VASH1Q7L8A9 365 aaPredicted RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 FBXO6Q9NRD1 293 aaPredicted RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 DDX18Q9NVP1 670 aaKnown RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 TLX3O43711 291 aaPredicted RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 LRIG2O94898 1065 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 GLDCP23378 1020 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 HHEXQ03014 270 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 FBXL22Q6P050 247 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 N4BP2Q86UW6 1770 aaPredicted RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 CHTF18Q8WVB6 975 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 IPCEF1Q8WWN9 437 aaPredicted RBP10.85□□□□□ -0.67
POLR2A-209ENST00000617998 ASB2Q96Q27 587 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 POMKQ9H5K3 350 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 TAS2R14Q9NYV8 317 aa10.85□□□□□ -0.67
POLR2A-209ENST00000617998 FAM234BA2RU67 622 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 ZNF840PA6NDX5 716 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 IL10P22301 178 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 COL9A3Q14050 684 aaPredicted RBP10.84□□□□□ -0.67
POLR2A-209ENST00000617998 PDCD2Q16342 344 aaPredicted RBP10.84□□□□□ -0.67
POLR2A-209ENST00000617998 ARHGAP17Q68EM7 881 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 HIPK4Q8NE63 616 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 SORCS1Q8WY21 1168 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 LINC00597Q9H2U6 94 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 SEMA3GQ9NS98 782 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 A0A1B0GTH6 734 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 TTC34A8MYJ7 566 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 APOC4-APOC2K7ER74 178 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 TP53I11O14683 189 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 GLRA3O75311 464 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 REM1O75628 298 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 APOC2P02655 101 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 C4BPAP04003 597 aaKnown RBP10.84□□□□□ -0.67
POLR2A-209ENST00000617998 FHP07954 510 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 NQO1P15559 274 aaKnown RBP10.84□□□□□ -0.67
POLR2A-209ENST00000617998 SLC26A9Q7LBE3 791 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 ZADH2Q8N4Q0 377 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 ZMIZ2Q8NF64 920 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 MIPOL1Q8TD10 442 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 AZIN2Q96A70 460 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 CHP1Q99653 195 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 PPCSQ9HAB8 311 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 DNMT3BQ9UBC3 853 aaKnown RBP10.84□□□□□ -0.67
POLR2A-209ENST00000617998 CFL2Q9Y281 166 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 NR1I3Q14994 352 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 SYNPOQ8N3V7 929 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 LINGO1Q96FE5 620 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 MCMBPQ9BTE3 642 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 EPN3Q9H201 632 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 EXD2Q9NVH0 621 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 KCND3Q9UK17 655 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 SNX10Q9Y5X0 201 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 HS3ST4Q9Y661 456 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 PAPPAQ13219 1627 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 RNF103-CHMP3A0A140T963 221 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 GJA4P35212 333 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 VSNL1P62760 191 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 CCNYL2Q5T2Q4 361 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 GRTP1Q5TC63 336 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 TMEM25Q86YD3 366 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 SPEM1Q8N4L4 309 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 SH2D3CQ8N5H7 860 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 TCEAL4Q96EI5 215 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 NFKBIL1Q9UBC1 381 aaPredicted RBP10.84□□□□□ -0.67
POLR2A-209ENST00000617998 DCTN4Q9UJW0 460 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 KLK10O43240 276 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 VPS26BQ4G0F5 336 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 SCIMPQ6UWF3 145 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 PARM1Q6UWI2 310 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 TMEM151BQ8IW70 566 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 TCAIMQ8N3R3 496 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 FBXW11Q9UKB1 542 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 MAN2B2Q9Y2E5 1009 aa10.84□□□□□ -0.67
POLR2A-209ENST00000617998 TOP3BO95985 862 aaKnown RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 NUDT2P50583 147 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 CCL11P51671 97 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 GNGT1P63211 74 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 MFSD7Q6UXD7 560 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 SERPINA9Q86WD7 417 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 FBXL16Q8N461 479 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 METTL27Q8N6F8 245 aaPredicted RBP10.83□□□□□ -0.68
POLR2A-209ENST00000617998 SLC4A11Q8NBS3 891 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 ZNF354BQ96LW1 612 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 RNF157Q96PX1 679 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 HERPUD2Q9BSE4 406 aa10.83□□□□□ -0.68
POLR2A-209ENST00000617998 TRIM51Q9BSJ1 452 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms