RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 VPS33AQ96AX1 596 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 SEZ6LQ9BYH1 1024 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 NME7Q9Y5B8 376 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ARFGEF1Q9Y6D6 1849 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 TP73O15350 636 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 COCHO43405 550 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ITGAXP20702 1163 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 AP5B1Q2VPB7 878 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 SYT12Q8IV01 421 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 SLC44A2Q8IWA5 706 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 FBXO30Q8TB52 745 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 COPG1Q9Y678 874 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 EME2A4GXA9 379 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 GRM6O15303 877 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ABCB1P08183 1280 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 CNPP09543 421 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 HERVK_113P63132 956 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZNF534Q76KX8 674 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 KREMEN2Q8NCW0 462 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ERVK-6Q9BXR3 956 aa13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZCCHC2Q9C0B9 1178 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 TFB2MQ9H5Q4 396 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 POLR3HQ9Y535 204 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3B-206ENST00000616407 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 KCNH1O95259 989 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 PGM3O95394 542 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 PEX2P28328 305 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 RAP1GDS1P52306 607 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 RING1Q06587 406 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 PITRM1Q5JRX3 1037 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 LRRC73Q5JTD7 316 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 REP15Q6BDI9 236 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 DOK6Q6PKX4 331 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 NAPRTQ6XQN6 538 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 ACTRT2Q8TDY3 377 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 MIEF2Q96C03 454 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 SNX6Q9UNH7 406 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 DHRS12A0PJE2 317 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 STX16-NPEPL1H3BU86 382 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 WDR47O94967 919 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 PAPSS2O95340 614 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 RANBP10Q6VN20 620 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 CYP4V2Q6ZWL3 525 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 UBE2R2Q712K3 238 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 BEND5Q7L4P6 421 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 LYSMD3Q7Z3D4 306 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 CPSF7Q8N684 471 aaKnown RBP13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 RMND5BQ96G75 393 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 PPM1MQ96MI6 270 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 C9orf16Q9BUW7 83 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 MRM3Q9HC36 420 aaKnown RBP13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 ABCB8Q9NUT2 735 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 CD84Q9UIB8 345 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 RNASEH1O60930 286 aaKnown RBP13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 ADAMTS4O75173 837 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 TIPRLO75663 272 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 EPOP01588 193 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 CAPN1P07384 714 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 IFNA8P32881 189 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 CCT8P50990 548 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 ARSDP51689 593 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 CHN2P52757 468 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 GSTA3Q16772 222 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 SDE2Q6IQ49 451 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 IGSF21Q96ID5 467 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 HOPXQ9BPY8 73 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 AARSD1Q9BTE6 412 aaKnown RBP13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZNF711Q9Y462 761 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 LOXHD1Q8IVV2 1947 aa13.1□□□□□ -0.31
PPP4R3B-206ENST00000616407 CDC7O00311 574 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 EFCAB14O75071 495 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 GCNT7Q6ZNI0 430 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 ASRGL1Q7L266 308 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 PGBD3Q8N328 593 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 ZBTB2Q8N680 514 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 CLHC1Q8NHS4 586 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 MAGEE2Q8TD90 523 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 TDRKHQ9Y2W6 561 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 AP4B1Q9Y6B7 739 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 USP3Q9Y6I4 520 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 AK5Q9Y6K8 562 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 KDELR3O43731 214 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 STK16O75716 305 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 IL1BP01584 269 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 T-ENOLP0DO92 83 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 STC1P52823 247 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 THOP1P52888 689 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 SPATA19Q7Z5L4 167 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 DHRSXQ8N5I4 330 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 SUSD6Q92537 303 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 MIPEPQ99797 713 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 WDR83Q9BRX9 315 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 IGFLR1Q9H665 355 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 EBF2Q9HAK2 575 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 MARCH4Q9P2E8 410 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 PPM1HQ9ULR3 514 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 BBIP1A8MTZ0 92 aa13.09□□□□□ -0.31
PPP4R3B-206ENST00000616407 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms