RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 SLC23A2Q9UGH3 650 aa12.55□□□□□ -0.4
CSTF1-208ENST00000613138 ZMIZ1Q9ULJ6 1067 aa12.55□□□□□ -0.4
CSTF1-208ENST00000613138 ATXN7L1Q9ULK2 861 aaPredicted RBP12.55□□□□□ -0.4
CSTF1-208ENST00000613138 KCNK6Q9Y257 313 aa12.55□□□□□ -0.4
CSTF1-208ENST00000613138 A0A1W2PQM1 296 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 PDE2AO00408 941 aaPredicted RBP12.54□□□□□ -0.4
CSTF1-208ENST00000613138 KRT37O76014 449 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 ANXA9O76027 345 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 SLC25A14O95258 325 aaPredicted RBP12.54□□□□□ -0.4
CSTF1-208ENST00000613138 ECEL1O95672 775 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 IFNB1P01574 187 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 EPOP01588 193 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 PRSS56P0CW18 603 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 ACP5P13686 325 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 HLA-DPA1P20036 260 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 GRIA1P42261 906 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 KCNJ1P48048 391 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 DCDC1P59894 354 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 ILKQ13418 452 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 KCTD11Q693B1 232 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 OGFOD3Q6PK18 319 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 ARHGEF18Q6ZSZ5 1173 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 CHST15Q7LFX5 561 aaPredicted RBP12.54□□□□□ -0.4
CSTF1-208ENST00000613138 TMPRSS9Q7Z410 1059 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 B3GNT8Q7Z7M8 397 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 NAGSQ8N159 534 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 TRAM1L1Q8N609 369 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
CSTF1-208ENST00000613138 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 OR4K2Q8NGD2 314 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 ZDHHC1Q8WTX9 485 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 GLYATL1Q969I3 302 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 MS4A14Q96JA4 679 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 ALS2CR12Q96Q35 445 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 FAM96AQ9H5X1 160 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 FKBPLQ9UIM3 349 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 CLCA2Q9UQC9 943 aa12.54□□□□□ -0.4
CSTF1-208ENST00000613138 DSPP15924 2871 aaKnown RBP12.54□□□□□ -0.4
CSTF1-208ENST00000613138 RGSL1A5PLK6 1076 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 CEP104O60308 925 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 CSO75390 466 aaKnown RBP12.53□□□□□ -0.4
CSTF1-208ENST00000613138 STK10O94804 968 aaKnown RBP12.53□□□□□ -0.4
CSTF1-208ENST00000613138 FGGP02679 453 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 HMGCLP35914 325 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 DUSP3P51452 185 aaPredicted RBP12.53□□□□□ -0.4
CSTF1-208ENST00000613138 TERF1P54274 439 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 ILF3Q12906 894 aaKnown RBP eCLIP12.53□□□□□ -0.4
CSTF1-208ENST00000613138 HLTFQ14527 1009 aaKnown RBP eCLIP12.53□□□□□ -0.4
CSTF1-208ENST00000613138 C14orf28Q4W4Y0 310 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 LVRNQ6Q4G3 990 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 GALNT13Q8IUC8 556 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 ZNF547Q8IVP9 402 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 KLHDC8BQ8IXV7 354 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 SLC35F6Q8N357 371 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 DCBLD1Q8N8Z6 715 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 SCG3Q8WXD2 468 aaKnown RBP12.53□□□□□ -0.4
CSTF1-208ENST00000613138 ATXN7L3BQ96GX2 97 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 GSDMCQ9BYG8 508 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 FOXP3Q9BZS1 431 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 ABCG4Q9H172 646 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 CARD9Q9H257 536 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 ETNK1Q9HBU6 452 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 TRNAU1APQ9NX07 287 aaKnown RBP12.53□□□□□ -0.4
CSTF1-208ENST00000613138 TBC1D29Q9UFV1 150 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 PYCARDQ9ULZ3 195 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 CFAP47Q6ZTR5 3102 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 PKD1L2Q7Z442 2459 aa12.53□□□□□ -0.4
CSTF1-208ENST00000613138 PRAMEF33A0A0G2JMD5 474 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 PPM1DO15297 605 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 GRID2O43424 1007 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 NUAK1O60285 661 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 SNX2O60749 519 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 MPOP05164 745 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 RPLP0P05388 317 aaKnown RBP12.52□□□□□ -0.41
CSTF1-208ENST00000613138 GP1BAP07359 652 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 SPAM1P38567 509 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 CDKN1CP49918 316 aaPredicted RBP12.52□□□□□ -0.41
CSTF1-208ENST00000613138 CTSCP53634 463 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 OR1D5P58170 312 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 E2F1Q01094 437 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 PRPSAP1Q14558 356 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 PARP6Q2NL67 630 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 CCDC38Q502W7 563 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 CERCAMQ5T4B2 595 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 NKAIN2Q5VXU1 208 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 ARL14Q8N4G2 192 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 KDF1Q8NAX2 398 aaPredicted RBP12.52□□□□□ -0.41
CSTF1-208ENST00000613138 OR52K1Q8NGK4 314 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 GLMNQ92990 594 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 RTP4Q96DX8 246 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 DNAJC1Q96KC8 554 aaKnown RBP12.52□□□□□ -0.41
CSTF1-208ENST00000613138 ZSCAN5AQ9BUG6 496 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 PRDM8Q9NQV8 689 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 SCHIP1Q9P0W5 487 aaPredicted RBP12.52□□□□□ -0.41
CSTF1-208ENST00000613138 VPS18Q9P253 973 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 LRIT1Q9P2V4 623 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 NFKBIL1Q9UBC1 381 aaPredicted RBP12.52□□□□□ -0.41
CSTF1-208ENST00000613138 ZNF148Q9UQR1 794 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 DNAJC16Q9Y2G8 782 aa12.52□□□□□ -0.41
CSTF1-208ENST00000613138 RAXQ9Y2V3 346 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms