RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 SNX2O60749 519 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 C1RP00736 705 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 BMP1P13497 986 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 RPS24P62847 133 aaKnown RBP13.96□□□□□ -0.17
COL6A1-207ENST00000612273 TAF10Q12962 218 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 TAF1CQ15572 869 aaPredicted RBP13.96□□□□□ -0.17
COL6A1-207ENST00000612273 SYVN1Q86TM6 617 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 ERI1Q8IV48 349 aaKnown RBP13.96□□□□□ -0.17
COL6A1-207ENST00000612273 KIAA2013Q8IYS2 634 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 LGI2Q8N0V4 545 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 CLHC1Q8NHS4 586 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 CDKN2AIPNLQ96HQ2 116 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 CHID1Q9BWS9 393 aa13.96□□□□□ -0.17
COL6A1-207ENST00000612273 CELF2O95319 508 aaKnown RBP13.96□□□□□ -0.18
COL6A1-207ENST00000612273 VARSP26640 1264 aaKnown RBP13.96□□□□□ -0.18
COL6A1-207ENST00000612273 HTR6P50406 440 aa13.96□□□□□ -0.18
COL6A1-207ENST00000612273 SELPLGQ14242 412 aa13.96□□□□□ -0.18
COL6A1-207ENST00000612273 TAF2Q6P1X5 1199 aa13.96□□□□□ -0.18
COL6A1-207ENST00000612273 ZNF598Q86UK7 904 aaKnown RBP13.96□□□□□ -0.18
COL6A1-207ENST00000612273 PIANPQ8IYJ0 282 aa13.96□□□□□ -0.18
COL6A1-207ENST00000612273 OR6K2Q8NGY2 324 aa13.96□□□□□ -0.18
COL6A1-207ENST00000612273 OR2T11Q8NH01 316 aa13.96□□□□□ -0.18
COL6A1-207ENST00000612273 EEF1AKMT1Q8WVE0 214 aa13.96□□□□□ -0.18
COL6A1-207ENST00000612273 CENPNQ96H22 339 aaPredicted RBP13.96□□□□□ -0.18
COL6A1-207ENST00000612273 MUS81Q96NY9 551 aa13.96□□□□□ -0.18
COL6A1-207ENST00000612273 DGCR6LQ9BY27 220 aa13.96□□□□□ -0.18
COL6A1-207ENST00000612273 CCDC90BQ9GZT6 254 aa13.96□□□□□ -0.18
COL6A1-207ENST00000612273 CBX4O00257 560 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 TNFRSF10BO14763 440 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 CYP2C18P33260 490 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 AARS2Q5JTZ9 985 aaKnown RBP13.95□□□□□ -0.18
COL6A1-207ENST00000612273 CD300LGQ6UXG3 332 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 C16orf59Q7L2K0 433 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 POLR1EQ9GZS1 481 aaKnown RBP13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ZFYVE28Q9HCC9 887 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 TRMT13Q9NUP7 481 aaKnown RBP13.95□□□□□ -0.18
COL6A1-207ENST00000612273 PTGES3LE9PB15 166 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 RSL1D1O76021 490 aaKnown RBP13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ZBTB11O95625 1053 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-207ENST00000612273 LDLRP01130 860 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 IRF1P10914 325 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 BMP2P12643 396 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 IL7RP16871 459 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 PRKACGP22612 351 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 RPS9P46781 194 aaKnown RBP13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ALDH3B2P48448 385 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 LCP2Q13094 533 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 RAB39AQ14964 217 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 NANOGP8Q6NSW7 305 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 IL27RAQ6UWB1 636 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 GLT6D1Q7Z4J2 308 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 GIPC3Q8TF64 312 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 MTFMTQ96DP5 389 aaKnown RBP13.95□□□□□ -0.18
COL6A1-207ENST00000612273 CCDC97Q96F63 343 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ITCHQ96J02 903 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ATOH8Q96SQ7 321 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 TRMOQ9BU70 441 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 TRIM15Q9C019 465 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ARMC7Q9H6L4 198 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 NANOGQ9H9S0 305 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ZFP14Q9HCL3 533 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 AGPAT4Q9NRZ5 378 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 AASSQ9UDR5 926 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ANAPC2Q9UJX6 822 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 UTS2RQ9UKP6 389 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 GIT1Q9Y2X7 761 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 DGKBQ9Y6T7 804 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ZFC3H1O60293 1989 aaKnown RBP13.95□□□□□ -0.18
COL6A1-207ENST00000612273 KANSL1LA0AUZ9 987 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ASPDHA6ND91 283 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 E5RI56 91 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 IL12AP29459 219 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 GDF5P43026 501 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 TUSC3Q13454 348 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 LAPTM4AQ15012 233 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 PSAPL1Q6NUJ1 521 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 FAM86B1Q8N7N1 296 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ANKFN1Q8N957 763 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 TRPV3Q8NET8 790 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 STAG3L4Q8TBR4 150 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ROPN1LQ96C74 230 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 BIRC7Q96CA5 298 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 PLEKHG4BQ96PX9 1271 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 KATNAL1Q9BW62 490 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 APOL5Q9BWW9 433 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 SMURF2Q9HAU4 748 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 TAS2R13Q9NYV9 303 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 FKBPLQ9UIM3 349 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 ZNF225Q9UK10 706 aa13.95□□□□□ -0.18
COL6A1-207ENST00000612273 TNPO2O14787 897 aaKnown RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 SLC22A3O75751 556 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 SERPINF2P08697 491 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 FDXRP22570 491 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 MAP4P27816 1152 aaKnown RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 RPL9P32969 192 aaKnown RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 POLD2P49005 469 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 ACADVLP49748 655 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 ZNF135P52742 658 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-207ENST00000612273 GNA12Q03113 381 aa13.94□□□□□ -0.18
COL6A1-207ENST00000612273 TRIM32Q13049 653 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms