RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 HIPK3Q9H422 1215 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 ZFYVE1Q9HBF4 777 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 ZFP14Q9HCL3 533 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 PRKAG2Q9UGJ0 569 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 EIF2B4Q9UI10 523 aaKnown RBP6.34□□□□□ -1.4
SNX13-213ENST00000611725 RAB26Q9ULW5 256 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 ATP11BQ9Y2G3 1177 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 YIPF1Q9Y548 306 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 CHD4Q14839 1912 aa6.34□□□□□ -1.4
SNX13-213ENST00000611725 NPEPPSL1A6NEC2 478 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 DNAJA2O60884 412 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 SLC10A3P09131 477 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 DSC1Q08554 894 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TAF1AQ15573 450 aaPredicted RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 ZNF284Q2VY69 593 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 MTX3Q5HYI7 312 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 IL23RQ5VWK5 629 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ZDHHC13Q8IUH4 622 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 SLC39A13Q96H72 371 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 LIMD1Q9UGP4 676 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 PCDHB1Q9Y5F3 818 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 CPQQ9Y646 472 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 HNRNPRO43390 633 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 SLC7A1P30825 629 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 HOXC13P31276 330 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 GNPDA1P46926 289 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 NUP107P57740 925 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 GALNT1Q10472 559 aaPredicted RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 CCNIQ14094 377 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TTC23Q5W5X9 447 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ZNF598Q86UK7 904 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 SPPL2CQ8IUH8 684 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 FIBCD1Q8N539 461 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 LRTOMTQ8WZ04 291 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ACDQ96AP0 544 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TMEM159Q96B96 161 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 YME1L1Q96TA2 773 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TDRD1Q9BXT4 1180 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 RMND5AQ9H871 391 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 RNF186Q9NXI6 227 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ECI2O75521 394 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 GALTP07902 379 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 PABPC4LP0CB38 370 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 GABRR2P28476 465 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 S100A3P33764 101 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 NRG1Q02297 640 aaPredicted RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 VAC14Q08AM6 782 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 REP15Q6BDI9 236 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 OR13J1Q8NGT2 312 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 GFM2Q969S9 779 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 SCLYQ96I15 445 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TBCDQ9BTW9 1192 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ZDHHC7Q9NXF8 308 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ADAMTS6Q9UKP5 1117 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 FCF1Q9Y324 198 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 RGS14O43566 566 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TMCC1O94876 653 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 SLC25A14O95258 325 aaPredicted RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 CATP04040 527 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 C1QTNF8P60827 252 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 CACNG1Q06432 222 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TRAF2Q12933 501 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 LPCAT2Q7L5N7 544 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 SFRP1Q8N474 314 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 CENPNQ96H22 339 aaPredicted RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 DEFB118Q96PH6 123 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 DCUN1D5Q9BTE7 237 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 FADS3Q9Y5Q0 445 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TNFRSF10BO14763 440 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 RNASEH2AO75792 299 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 OR56A5P0C7T3 313 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 CD1DP15813 335 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 CCND3P30281 292 aaPredicted RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 MAGEA12P43365 314 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ECT2LQ008S8 904 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TMED1Q13445 227 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 MAVSQ7Z434 540 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 METTL3Q86U44 580 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 CLVS1Q8IUQ0 354 aaPredicted RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 COLGALT2Q8IYK4 626 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ZNF555Q8NEP9 628 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 CD99L2Q8TCZ2 262 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TOP1MTQ969P6 601 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 MRPL17Q9NRX2 175 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 GON4LQ3T8J9 2241 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 hCG_2014768A0A024R1R8 64 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 MYO1GB0I1T2 1018 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TMEM189-UBE2V1I3L0A0 370 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ARVCFO00192 962 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 INHAP05111 366 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 UROSP10746 265 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 TTKP33981 857 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 SNRPD1P62314 119 aaKnown RBP6.33□□□□□ -1.4
SNX13-213ENST00000611725 MS4A2Q01362 244 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 DSC3Q14574 896 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 PPP1R3AQ16821 1122 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 RABL3Q5HYI8 236 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 ZNF678Q5SXM1 525 aa6.33□□□□□ -1.4
SNX13-213ENST00000611725 CST9Q5W186 159 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms