RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PPP1R16AQ96I34 528 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 C20orf27Q9GZN8 174 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 CDH19Q9H159 772 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 ZNF395Q9H8N7 513 aaPredicted RBP21.41■■□□□ 1.02
USP6NL-204ENST00000606752 NPHS2Q9NP85 383 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 COLQQ9Y215 455 aaPredicted RBP21.41■■□□□ 1.02
USP6NL-204ENST00000606752 STON1Q9Y6Q2 735 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 XIRP2A4UGR9 3374 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 RGSL1A5PLK6 1076 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 NPC1O15118 1278 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 DLX3O60479 287 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 NIPSNAP2O75323 286 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 TFEBP19484 476 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 METAP1P53582 386 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 DCDC1P59894 354 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 IFT88Q13099 833 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 ENPP2Q13822 863 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 ATP13A5Q4VNC0 1218 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 LIPMQ5VYY2 423 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 FBXL19Q6PCT2 694 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 CRLF3Q8IUI8 442 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 DTX3LQ8TDB6 740 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 ARRDC3Q96B67 414 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 ULK4Q96C45 1275 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 FAM161BQ96MY7 647 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 BOCQ9BWV1 1114 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 FAM83DQ9H4H8 585 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 ZDHHC4Q9NPG8 344 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 TRMT6Q9UJA5 497 aaKnown RBP21.41■■□□□ 1.02
USP6NL-204ENST00000606752 SCN8AQ9UQD0 1980 aa21.41■■□□□ 1.02
USP6NL-204ENST00000606752 E5RI56 91 aa21.4■■□□□ 1.02
USP6NL-204ENST00000606752 CD1DP15813 335 aa21.4■■□□□ 1.02
USP6NL-204ENST00000606752 PTRHD1Q6GMV3 140 aaKnown RBP21.4■■□□□ 1.02
USP6NL-204ENST00000606752 LIPIQ6XZB0 460 aa21.4■■□□□ 1.02
USP6NL-204ENST00000606752 Q6ZVL8 140 aa21.4■■□□□ 1.02
USP6NL-204ENST00000606752 NKAPQ8N5F7 415 aaKnown RBP21.4■■□□□ 1.02
USP6NL-204ENST00000606752 ZDHHC3Q9NYG2 299 aa21.4■■□□□ 1.02
USP6NL-204ENST00000606752 GALPQ9UBC7 116 aa21.4■■□□□ 1.02
USP6NL-204ENST00000606752 CD84Q9UIB8 345 aa21.4■■□□□ 1.02
USP6NL-204ENST00000606752 GNPTGQ9UJJ9 305 aa21.4■■□□□ 1.02
USP6NL-204ENST00000606752 C1QTNF3-AMACRE9PGA6 284 aa21.39■■□□□ 1.02
USP6NL-204ENST00000606752 H3BMM5 538 aa21.39■■□□□ 1.02
USP6NL-204ENST00000606752 ITM2AO43736 263 aa21.39■■□□□ 1.02
USP6NL-204ENST00000606752 ATP5F1P24539 256 aaPredicted RBP21.39■■□□□ 1.02
USP6NL-204ENST00000606752 ABCE1P61221 599 aaKnown RBP21.39■■□□□ 1.02
USP6NL-204ENST00000606752 PFKPQ01813 784 aa21.39■■□□□ 1.02
USP6NL-204ENST00000606752 ASPHQ12797 758 aa21.39■■□□□ 1.02
USP6NL-204ENST00000606752 MMAAQ8IVH4 418 aaKnown RBP21.39■■□□□ 1.02
USP6NL-204ENST00000606752 CHPFQ8IZ52 775 aa21.39■■□□□ 1.02
USP6NL-204ENST00000606752 ZNF513Q8N8E2 541 aaPredicted RBP21.39■■□□□ 1.02
USP6NL-204ENST00000606752 GATA5Q9BWX5 397 aaPredicted RBP21.39■■□□□ 1.02
USP6NL-204ENST00000606752 SPATA16Q9BXB7 569 aa21.39■■□□□ 1.02
USP6NL-204ENST00000606752 DERL2Q9GZP9 239 aa21.39■■□□□ 1.02
USP6NL-204ENST00000606752 TRPV5Q9NQA5 729 aa21.39■■□□□ 1.02
USP6NL-204ENST00000606752 DYRK4Q9NR20 520 aa21.39■■□□□ 1.02
USP6NL-204ENST00000606752 NFKBIL1Q9UBC1 381 aaPredicted RBP21.39■■□□□ 1.02
USP6NL-204ENST00000606752 TRIOBPQ9H2D6 2365 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 TMEM114B3SHH9 223 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 C2CD4DB7Z1M9 353 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 H0Y858 1186 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 K7EQS6 105 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 ZBTB14O43829 449 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 ELFN1P0C7U0 828 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 ELP6Q0PNE2 266 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 NAPRTQ6XQN6 538 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 TECPR1Q7Z6L1 1165 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 RAVER1Q8IY67 606 aaKnown RBP21.39■■□□□ 1.01
USP6NL-204ENST00000606752 SIDT2Q8NBJ9 832 aaKnown RBP21.39■■□□□ 1.01
USP6NL-204ENST00000606752 CD200R1Q8TD46 325 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 C10orf82Q8WW14 230 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 CCDC126Q96EE4 140 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 SGF29Q96ES7 293 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 CCDC97Q96F63 343 aaPredicted RBP21.39■■□□□ 1.01
USP6NL-204ENST00000606752 COPS8Q99627 209 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 SLC30A3Q99726 388 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 TFB2MQ9H5Q4 396 aaKnown RBP21.39■■□□□ 1.01
USP6NL-204ENST00000606752 ALG9Q9H6U8 611 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 DHRS7Q9Y394 339 aa21.39■■□□□ 1.01
USP6NL-204ENST00000606752 ZNF106Q9H2Y7 1883 aaKnown RBP21.38■■□□□ 1.01
USP6NL-204ENST00000606752 IQCF5A8MTL0 148 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 SPECC1L-ADORA2AF8WAN1 911 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 PSMD11O00231 422 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 ADRB3P13945 408 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 KCNA5P22460 613 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 ETV3P41162 512 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 NSG1P42857 185 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 KIR2DL1P43626 348 aaPredicted RBP21.38■■□□□ 1.01
USP6NL-204ENST00000606752 CLCN7P51798 805 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 ATP6V0D1P61421 351 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 FAM46CQ5VWP2 391 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 MACC1Q6ZN28 852 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 RFWD2Q8NHY2 731 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 RHEBL1Q8TAI7 183 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 PPP4R1Q8TF05 950 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 SCAMP4Q969E2 229 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 PTERQ96BW5 349 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 TCF20Q9UGU0 1960 aaKnown RBP21.38■■□□□ 1.01
USP6NL-204ENST00000606752 ITM2BQ9Y287 266 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 PRSS21Q9Y6M0 314 aa21.38■■□□□ 1.01
USP6NL-204ENST00000606752 USH1CQ9Y6N9 552 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms