RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SYBUQ9NX95 663 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MOCS1Q9NZB8 636 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 DTLQ9NZJ0 730 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 MTRRQ9UBK8 725 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 KLQ9UEF7 1012 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ANAPC2Q9UJX6 822 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 KIAA1257Q9ULG3 409 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCDHB10Q9UN67 800 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 SNX7Q9UNH6 387 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 AKT3Q9Y243 479 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 NOSIPQ9Y314 301 aaKnown RBP4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 NAALAD2Q9Y3Q0 740 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCDHAC2Q9Y5I4 1007 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 CSNK1G3Q9Y6M4 447 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCM1Q15154 2024 aa4.07□□□□□ -1.76
HMGB1P50-201ENST00000605814 ADGRA2Q96PE1 1338 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CNTNAP2Q9UHC6 1331 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYP2D7A0A087X1C5 515 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 A0A1W2PQ67 120 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 TCRBV5S1A1TA0A578 114 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MAGEB16A2A368 324 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM191CA6NGB0 347 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 HMX3A6NHT5 357 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZSCAN5BA6NJL1 495 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SNTNA6NMZ2 147 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CENPXA8MT69 81 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MEI4A8MW99 385 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 C22orf46C9J442 243 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 AP3B1O00203 1094 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ENPP3O14638 875 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 HDAC3O15379 428 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 PDPK1O15530 556 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 DCXO43602 365 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 DFNA5O60443 496 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 UPK1BO75841 260 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 TSPAN9O75954 239 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SUPT7LO94864 414 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ENDOD1O94919 500 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CDK14O94921 469 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCNH1O95259 989 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 GCNT3O95395 438 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 TOP3BO95985 862 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCNE2O96020 404 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 FOSP01100 380 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 THBDP07204 575 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CYP3A4P08684 503 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM191BP0C7N4 346 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 NAT2P11245 290 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CDH1P12830 882 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 GYS1P13807 737 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ETS1P14921 441 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 NCF2P19878 526 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 IL10P22301 178 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 EEF1DP29692 281 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MAGEA3P43357 314 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MAGEA12P43365 314 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 RAD23AP54725 363 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MLLT6P55198 1093 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 EIF3EP60228 445 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 PSME3P61289 254 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 DYNLL1P63167 89 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 OTUD4Q01804 1114 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF45Q02386 682 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 BNIP2Q12982 314 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 FADDQ13158 208 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ART3Q13508 389 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 PIGHQ14442 188 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 KCNJ11Q14654 390 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ACOX1Q15067 660 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 STILQ15468 1287 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 TAF5Q15542 800 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CRY1Q16526 586 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CTF1Q16619 201 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 NRF1Q16656 503 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 LEXMQ3ZCV2 418 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 CEP55Q53EZ4 464 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MDH1BQ5I0G3 518 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SAMD4BQ5PRF9 694 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 BRMS1LQ5PSV4 323 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ANKRD22Q5VYY1 191 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 STEAP4Q687X5 459 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 XAF1Q6GPH4 301 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 FAM45BPQ6NSW5 357 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF544Q6NX49 715 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF585AQ6P3V2 769 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 XKRXQ6PP77 449 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MFSD7Q6UXD7 560 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC16A12Q6ZSM3 486 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 C15orf52Q6ZUT6 534 aaKnown RBP4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SPATC1Q76KD6 591 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 MON1BQ7L1V2 547 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 HDDC2Q7Z4H3 204 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC47A2Q86VL8 602 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC22A16Q86VW1 577 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 OSTM1Q86WC4 334 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 WDR49Q8IV35 697 aa4.06□□□□□ -1.76
HMGB1P50-201ENST00000605814 LYSMD2Q8IV50 215 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms