RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 IGFBP4P22692 258 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ATP5F1P24539 256 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MRPS21P82921 87 aaKnown RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DMTNQ08495 405 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GALNT1Q10472 559 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 BST1Q10588 318 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DLG1Q12959 904 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 STX3Q13277 289 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 AGERQ15109 404 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CHRNA6Q15825 494 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PUS10Q3MIT2 529 aaKnown RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FBXO43Q4G163 708 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SPDYAQ5MJ70 313 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CTSL3PQ5NE16 218 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 EGFLAMQ63HQ2 1017 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 LIPIQ6XZB0 460 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ERN2Q76MJ5 926 aaKnown RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TAS2R42Q7RTR8 314 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 OTOAQ7RTW8 1153 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PIWIL4Q7Z3Z4 852 aaKnown RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 LDB1Q86U70 411 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 HOMEZQ8IX15 550 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GBP7Q8N8V2 638 aaPredicted RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DDHD1Q8NEL9 900 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KIAA1191Q96A73 305 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FAM131CQ96AQ9 280 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 NXNL1Q96CM4 212 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 COQ10AQ96MF6 247 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PANX3Q96QZ0 392 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 COPS8Q99627 209 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 RPP25Q9BUL9 199 aaKnown RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TRIM55Q9BYV6 548 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FAM107BQ9H098 131 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 C12orf65Q9H3J6 166 aaKnown RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FAM83DQ9H4H8 585 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 XPR1Q9UBH6 696 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TRMT6Q9UJA5 497 aaKnown RBP12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 HAO1Q9UJM8 370 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 HCN2Q9UL51 889 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SCML1Q9UN30 329 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DHRS7Q9Y394 339 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 STON1Q9Y6Q2 735 aa12.19□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SYCE1LA8MT33 242 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CFAP99D6REC4 459 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 E5RI56 91 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 K7EQS6 105 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 KPNA5O15131 536 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 NPHS1O60500 1241 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MAGEC1O60732 1142 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TOP3BO95985 862 aaKnown RBP12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 EPHX1P07099 455 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GSTM1P09488 218 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SBK3P0C264 359 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CBSLP0DN79 551 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CD1DP15813 335 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SAT1P21673 171 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 C5AR1P21730 350 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FMO4P31512 558 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CBSP35520 551 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GALK1P51570 392 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CLCN7P51798 805 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 GSTM4Q03013 218 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DPTQ07507 201 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CSHL1Q14406 222 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PTPRRQ15256 657 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ZNF284Q2VY69 593 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TMEM196Q5HYL7 178 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 LDLRAP1Q5SW96 308 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CGB2Q6NT52 195 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FBXL19Q6PCT2 694 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 C6orf89Q6UWU4 347 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CRLF3Q8IUI8 442 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 C10orf107Q8IVU9 208 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ZNF513Q8N8E2 541 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PPP1R14CQ8TAE6 165 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 CD200R1Q8TD46 325 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 PPP4R1Q8TF05 950 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 MYLIPQ8WY64 445 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 INPP5DQ92835 1189 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ARRDC3Q96B67 414 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 DTD2Q96FN9 168 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SCYL1Q96KG9 808 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ELAC2Q9BQ52 826 aaKnown RBP12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TRMOQ9BU70 441 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 EPHX3Q9H6B9 360 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SLCO1B3Q9NPD5 702 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SLC2A4RGQ9NR83 387 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ZNF358Q9NW07 568 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 SARDHQ9UL12 918 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 FAM50BQ9Y247 325 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 USH1CQ9Y6N9 552 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TRIOBPQ9H2D6 2365 aa12.18□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 ANKRD12Q6UB98 2062 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 WDR91A4D1P6 747 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 C2CD4DB7Z1M9 353 aa12.17□□□□□ -0.46
NEDD8-MDP1-203ENST00000604306 TK2O00142 265 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms