RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TEX12Q9BXU0 123 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 GLIS2Q9BZE0 524 aaPredicted RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 RBM38Q9H0Z9 239 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 CCDC134Q9H6E4 229 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 TDP1Q9NUW8 608 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ZSCAN32Q9NX65 697 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 DTLQ9NZJ0 730 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 ANKMY1Q9P2S6 941 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 STX18Q9P2W9 335 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 RBMX2Q9Y388 322 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 UTP11Q9Y3A2 253 aaKnown RBP5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 PCDHA13Q9Y5I0 950 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 CSADQ9Y600 493 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC12A7Q9Y666 1083 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 NEDD4P46934 1319 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 MAP3K15Q6ZN16 1313 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 BTAF1O14981 1849 aa5.01□□□□□ -1.61
SPTBN1-206ENST00000602898 AHRRA9YTQ3 701 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 B4E1Z4 1266 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 FPGTO14772 594 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SHOXO15266 292 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 EIF3DO15371 548 aaKnown RBP eCLIP5□□□□□ -1.61
SPTBN1-206ENST00000602898 AKAP8O43823 692 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 PEX1O43933 1283 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CTAG2O75638 210 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CLPXO76031 633 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 PCCBP05166 539 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 NPR1P16066 1061 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 EPHA8P29322 1005 aaPredicted RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC9A3P48764 834 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 BMXP51813 675 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 VAV2P52735 878 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 NPEPPSP55786 919 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 GFRA1P56159 465 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 TAS2R40P59535 323 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 TAP1Q03518 808 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CCDC6Q16204 474 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 WDR72Q3MJ13 1102 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 MANEAQ5SRI9 462 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 LIMS2Q7Z4I7 341 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SATL1Q86VE3 508 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CCDC105Q8IYK2 499 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 GPR65Q8IYL9 337 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 LINC00518Q8N0U6 118 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 KIF2BQ8N4N8 673 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 DTX3Q8N9I9 347 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 DYDC2Q96IM9 177 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 TMEM68Q96MH6 324 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 MMS19Q96T76 1030 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SYT17Q9BSW7 474 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 OSBPL6Q9BZF3 934 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 KLHL25Q9H0H3 589 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ADAM7Q9H2U9 754 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SLITRK6Q9H5Y7 841 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 AZI2Q9H6S1 392 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 RXFP1Q9HBX9 757 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CD209Q9NNX6 404 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF212Q9UDV6 495 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SAR1BQ9Y6B6 198 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 DICER1Q9UPY3 1922 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 SPATA31A1Q5TZJ5 1347 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM172BPA6NC97 362 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 PCP4L1A6NKN8 68 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 MEI4A8MW99 385 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 H7C1D1 291 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 HRKO00198 91 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 LDLRAD4O15165 306 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC16A3O15427 465 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 CBR3O75828 277 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 DNAJB5O75953 348 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 UNC5CO95185 931 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ANXA1P04083 346 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ASNSP08243 561 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 CYP21A2P08686 494 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ICAM2P13598 275 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 AGAP20933 346 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 G0S2P27469 103 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 MAGEA1P43355 309 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 RPL5P46777 297 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 PXNP49023 591 aaPredicted RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 GPX6P59796 221 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ZP2Q05996 745 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC34A1Q06495 639 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 OVGP1Q12889 678 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 PUM1Q14671 1186 aaKnown RBP eCLIP5□□□□□ -1.61
SPTBN1-206ENST00000602898 ALX1Q15699 326 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 LSM12Q3MHD2 195 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 TDRD12Q587J7 1177 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 AARS2Q5JTZ9 985 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 IER5Q5VY09 327 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 SLX4IPQ5VYV7 408 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 KIAA1161Q6NSJ0 714 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 AFTPHQ6ULP2 937 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 TAS2R42Q7RTR8 314 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ZC3HAV1Q7Z2W4 902 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 EFL1Q7Z2Z2 1120 aaKnown RBP5□□□□□ -1.61
SPTBN1-206ENST00000602898 PRUNE1Q86TP1 453 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM35AQ86V20 835 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 FAM129CQ86XR2 697 aa5□□□□□ -1.61
SPTBN1-206ENST00000602898 ERI1Q8IV48 349 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms