RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 HERPUD2Q9BSE4 406 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 MLPHQ9BV36 600 aaPredicted RBP17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 SLC25A18Q9H1K4 315 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 FBXO8Q9NRD0 319 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 CTTNBP2NLQ9P2B4 639 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 UVRAGQ9P2Y5 699 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 ATXN10Q9UBB4 475 aa17.8■□□□□ 0.44
CHMP2A-208ENST00000601220 C3orf70A6NLC5 250 aaPredicted RBP17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 A8MU76 341 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 KCNK1O00180 336 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 GRID2O43424 1007 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 KRT7P08729 469 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 ACP5P13686 325 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 F3P13726 295 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 ZNF8P17098 575 aaPredicted RBP17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 CASP14P31944 242 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 CLCNKAP51800 687 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 EPHA4P54764 986 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 UBE2IP63279 158 aaKnown RBP17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 SNAP47Q5SQN1 464 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 ZNF648Q5T619 568 aaPredicted RBP17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 BORAQ6PGQ7 559 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 ATG14Q6ZNE5 492 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 CCNYQ8ND76 341 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 GPR26Q8NDV2 337 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 NCSTNQ92542 709 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 TADA1Q96BN2 335 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 TEFMQ96QE5 360 aaKnown RBP17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 CTRCQ99895 268 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 CARD9Q9H257 536 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 ADNPQ9H2P0 1102 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 APMAPQ9HDC9 416 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 HAUS2Q9NVX0 235 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 PKD2L2Q9NZM6 624 aa17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 SCHIP1Q9P0W5 487 aaPredicted RBP17.79■□□□□ 0.44
CHMP2A-208ENST00000601220 SPTA1P02549 2419 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 KIR2DS5A0A0G2JLQ3 304 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 A0A0G2JNG1 304 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 PRR19A6NJB7 356 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 KIR2DS3K7RE56 304 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 PPFIA2O75334 1257 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 MAN1A1P33908 653 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 KIR2DS5Q14953 304 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 TMC3Q7Z5M5 1100 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 SLC9B2Q86UD5 537 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 CCHCR1Q8TD31 782 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 SH3KBP1Q96B97 665 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 IMP4Q96G21 291 aaKnown RBP17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 SLC45A3Q96JT2 553 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 TBC1D10AQ9BXI6 508 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 PRDM8Q9NQV8 689 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 OGFRQ9NZT2 677 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 CPNE7Q9UBL6 633 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 SLC23A2Q9UGH3 650 aa17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 TMEM184BQ9Y519 407 aaPredicted RBP17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 UBR5O95071 2799 aaPredicted RBP17.78■□□□□ 0.44
CHMP2A-208ENST00000601220 LOC101059948A0A1B0GTJ6 334 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 SYCE3A1L190 88 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 ZNF487B1APH4 448 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 CHUKO15111 745 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 NKX2-8O15522 239 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 SNX2O60749 519 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 H2AFZP0C0S5 128 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 MAP4P27816 1152 aaKnown RBP17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 POLE2P56282 527 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 GALNT3Q14435 633 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 SLC18A3Q16572 532 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 SLC9A4Q6AI14 798 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 H2AFVQ71UI9 128 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 ADGRG6Q86SQ4 1221 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 NLGN4XQ8N0W4 816 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 NLGN4YQ8NFZ3 816 aaPredicted RBP17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 PLEKHG4BQ96PX9 1271 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 ADGRE3Q9BY15 652 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 BRD8Q9H0E9 1235 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 OR2AG1Q9H205 316 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 UCK1Q9HA47 277 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 ZFYVE1Q9HBF4 777 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 TRIM39Q9HCM9 518 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 ARFGAP3Q9NP61 516 aa17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 SIDT1Q9NXL6 827 aaKnown RBP17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 NFKBIL1Q9UBC1 381 aaPredicted RBP17.77■□□□□ 0.44
CHMP2A-208ENST00000601220 HECTD1Q9ULT8 2610 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 LILRA5A6NI73 299 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 OR5K4A6NMS3 321 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 CAPN5O15484 640 aaPredicted RBP17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 DLGAP3O95886 979 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 C9P02748 559 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 ANKRD34CP0C6C1 535 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 XRCC1P18887 633 aaPredicted RBP17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 DCDC1P59894 354 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 CEACAM20Q6UY09 585 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 OLFM3Q96PB7 478 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 ZPBPQ9BS86 351 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 EPB41L1Q9H4G0 881 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 MAGEE1Q9HCI5 957 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 KLC4Q9NSK0 619 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 IFNKQ9P0W0 207 aa17.76■□□□□ 0.43
CHMP2A-208ENST00000601220 LCMT1Q9UIC8 334 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms