RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CPED1A4D0V7 1026 aa15.06■□□□□ 0
LIG1-219ENST00000600055 ERI2A8K979 691 aaKnown RBP15.06■□□□□ 0
LIG1-219ENST00000600055 CES2O00748 559 aa15.06■□□□□ 0
LIG1-219ENST00000600055 SUN1O94901 812 aa15.06■□□□□ 0
LIG1-219ENST00000600055 TRIM16O95361 564 aa15.06■□□□□ 0
LIG1-219ENST00000600055 CRTAMO95727 393 aa15.06■□□□□ 0
LIG1-219ENST00000600055 APRTP07741 180 aa15.06■□□□□ 0
LIG1-219ENST00000600055 TCP1P17987 556 aaKnown RBP15.06■□□□□ 0
LIG1-219ENST00000600055 COILP38432 576 aaPredicted RBP15.06■□□□□ 0
LIG1-219ENST00000600055 VPS41P49754 854 aa15.06■□□□□ 0
LIG1-219ENST00000600055 BASP1P80723 227 aaKnown RBP15.06■□□□□ 0
LIG1-219ENST00000600055 ILF3Q12906 894 aaKnown RBP eCLIP15.06■□□□□ 0
LIG1-219ENST00000600055 SEPT6Q14141 434 aa15.06■□□□□ 0
LIG1-219ENST00000600055 NR0B2Q15466 257 aa15.06■□□□□ 0
LIG1-219ENST00000600055 CYP1B1Q16678 543 aa15.06■□□□□ 0
LIG1-219ENST00000600055 CERCAMQ5T4B2 595 aa15.06■□□□□ 0
LIG1-219ENST00000600055 ZDHHC20Q5W0Z9 365 aa15.06■□□□□ 0
LIG1-219ENST00000600055 PAPD7Q5XG87 772 aaKnown RBP15.06■□□□□ 0
LIG1-219ENST00000600055 SLC30A9Q6PML9 568 aa15.06■□□□□ 0
LIG1-219ENST00000600055 PPP1R21Q6ZMI0 780 aa15.06■□□□□ 0
LIG1-219ENST00000600055 LINC00523Q86TU6 105 aa15.06■□□□□ 0
LIG1-219ENST00000600055 GALNT13Q8IUC8 556 aa15.06■□□□□ 0
LIG1-219ENST00000600055 PHYKPLQ8IUZ5 450 aa15.06■□□□□ 0
LIG1-219ENST00000600055 SDR16C5Q8N3Y7 309 aa15.06■□□□□ 0
LIG1-219ENST00000600055 DNAAF3Q8N9W5 541 aa15.06■□□□□ 0
LIG1-219ENST00000600055 SCG3Q8WXD2 468 aaKnown RBP15.06■□□□□ 0
LIG1-219ENST00000600055 DNAJC1Q96KC8 554 aaKnown RBP15.06■□□□□ 0
LIG1-219ENST00000600055 CAPZA3Q96KX2 299 aa15.06■□□□□ 0
LIG1-219ENST00000600055 VPS35Q96QK1 796 aa15.06■□□□□ 0
LIG1-219ENST00000600055 NAPGQ99747 312 aaPredicted RBP15.06■□□□□ 0
LIG1-219ENST00000600055 GSDMCQ9BYG8 508 aa15.06■□□□□ 0
LIG1-219ENST00000600055 TRIM39Q9HCM9 518 aa15.06■□□□□ 0
LIG1-219ENST00000600055 TAAR2Q9P1P5 351 aa15.06■□□□□ 0
LIG1-219ENST00000600055 PCDHGA1Q9Y5H4 931 aa15.06■□□□□ 0
LIG1-219ENST00000600055 SCN8AQ9UQD0 1980 aa15.05■□□□□ 0
LIG1-219ENST00000600055 SPTBN2O15020 2390 aa15.05■□□□□ 0
LIG1-219ENST00000600055 SPEGQ15772 3267 aa15.05■□□□□ -0
LIG1-219ENST00000600055 B4DGG1 531 aa15.05■□□□□ -0
LIG1-219ENST00000600055 NUAK1O60285 661 aa15.05■□□□□ -0
LIG1-219ENST00000600055 PPFIA2O75334 1257 aa15.05■□□□□ -0
LIG1-219ENST00000600055 PRAMEF1O95521 474 aa15.05■□□□□ -0
LIG1-219ENST00000600055 KRT14P02533 472 aa15.05■□□□□ -0
LIG1-219ENST00000600055 DUSP3P51452 185 aaPredicted RBP15.05■□□□□ -0
LIG1-219ENST00000600055 XIAPP98170 497 aa15.05■□□□□ -0
LIG1-219ENST00000600055 CDH17Q12864 832 aa15.05■□□□□ -0
LIG1-219ENST00000600055 CCDC38Q502W7 563 aa15.05■□□□□ -0
LIG1-219ENST00000600055 PERM1Q5SV97 790 aa15.05■□□□□ -0
LIG1-219ENST00000600055 CCDC137Q6PK04 289 aaKnown RBP15.05■□□□□ -0
LIG1-219ENST00000600055 CHST15Q7LFX5 561 aaPredicted RBP15.05■□□□□ -0
LIG1-219ENST00000600055 EFL1Q7Z2Z2 1120 aaKnown RBP15.05■□□□□ -0
LIG1-219ENST00000600055 ARL10Q8N8L6 244 aa15.05■□□□□ -0
LIG1-219ENST00000600055 GDAP1Q8TB36 358 aa15.05■□□□□ -0
LIG1-219ENST00000600055 IFI44Q8TCB0 444 aa15.05■□□□□ -0
LIG1-219ENST00000600055 ZNF398Q8TD17 642 aa15.05■□□□□ -0
LIG1-219ENST00000600055 DTX3LQ8TDB6 740 aa15.05■□□□□ -0
LIG1-219ENST00000600055 DPEP2Q9H4A9 486 aa15.05■□□□□ -0
LIG1-219ENST00000600055 CASS4Q9NQ75 786 aa15.05■□□□□ -0
LIG1-219ENST00000600055 KCND1Q9NSA2 647 aa15.05■□□□□ -0
LIG1-219ENST00000600055 ANGPTL2Q9UKU9 493 aa15.05■□□□□ -0
LIG1-219ENST00000600055 PADI4Q9UM07 663 aa15.05■□□□□ -0
LIG1-219ENST00000600055 TCRBV7S3A2A0A539 114 aa15.04■□□□□ -0
LIG1-219ENST00000600055 CTAGE9A4FU28 777 aa15.04■□□□□ -0
LIG1-219ENST00000600055 EME2A4GXA9 379 aaPredicted RBP15.04■□□□□ -0
LIG1-219ENST00000600055 FAM149AA5PLN7 773 aa15.04■□□□□ -0
LIG1-219ENST00000600055 CASC3O15234 703 aaKnown RBP15.04■□□□□ -0
LIG1-219ENST00000600055 GRID2O43424 1007 aa15.04■□□□□ -0
LIG1-219ENST00000600055 NOBOXO60393 691 aa15.04■□□□□ -0
LIG1-219ENST00000600055 PHF2O75151 1096 aa15.04■□□□□ -0
LIG1-219ENST00000600055 SRP72O76094 671 aaKnown RBP15.04■□□□□ -0
LIG1-219ENST00000600055 ACP5P13686 325 aa15.04■□□□□ -0
LIG1-219ENST00000600055 ACTR1BP42025 376 aa15.04■□□□□ -0
LIG1-219ENST00000600055 ACTR1AP61163 376 aa15.04■□□□□ -0
LIG1-219ENST00000600055 SHC2P98077 582 aa15.04■□□□□ -0
LIG1-219ENST00000600055 PDE1BQ01064 536 aa15.04■□□□□ -0
LIG1-219ENST00000600055 TMEM115Q12893 351 aaPredicted RBP15.04■□□□□ -0
LIG1-219ENST00000600055 PEX6Q13608 980 aa15.04■□□□□ -0
LIG1-219ENST00000600055 ITGA9Q13797 1035 aa15.04■□□□□ -0
LIG1-219ENST00000600055 GPRC6AQ5T6X5 926 aa15.04■□□□□ -0
LIG1-219ENST00000600055 OGFOD3Q6PK18 319 aa15.04■□□□□ -0
LIG1-219ENST00000600055 CRTC3Q6UUV7 619 aa15.04■□□□□ -0
LIG1-219ENST00000600055 C4orf22Q6V702 233 aa15.04■□□□□ -0
LIG1-219ENST00000600055 CREG2Q8IUH2 290 aa15.04■□□□□ -0
LIG1-219ENST00000600055 GPR156Q8NFN8 814 aa15.04■□□□□ -0
LIG1-219ENST00000600055 PATE1Q8WXA2 126 aa15.04■□□□□ -0
LIG1-219ENST00000600055 GLMNQ92990 594 aa15.04■□□□□ -0
LIG1-219ENST00000600055 FAM96AQ9H5X1 160 aa15.04■□□□□ -0
LIG1-219ENST00000600055 RMI1Q9H9A7 625 aa15.04■□□□□ -0
LIG1-219ENST00000600055 KCNK6Q9Y257 313 aa15.04■□□□□ -0
LIG1-219ENST00000600055 NEU2Q9Y3R4 380 aa15.04■□□□□ -0
LIG1-219ENST00000600055 MROH6A6NGR9 719 aa15.03■□□□□ -0
LIG1-219ENST00000600055 CHUKO15111 745 aa15.03■□□□□ -0
LIG1-219ENST00000600055 CDK14O94921 469 aa15.03■□□□□ -0
LIG1-219ENST00000600055 RPIAP49247 311 aa15.03■□□□□ -0
LIG1-219ENST00000600055 MAZP56270 477 aaKnown RBP15.03■□□□□ -0
LIG1-219ENST00000600055 GPS1Q13098 491 aa15.03■□□□□ -0
LIG1-219ENST00000600055 ILKQ13418 452 aa15.03■□□□□ -0
LIG1-219ENST00000600055 SMAD1Q15797 465 aaKnown RBP15.03■□□□□ -0
LIG1-219ENST00000600055 PLA2G4EQ3MJ16 856 aa15.03■□□□□ -0
LIG1-219ENST00000600055 TMPRSS7Q7RTY8 843 aa15.03■□□□□ -0
LIG1-219ENST00000600055 ZDHHC1Q8WTX9 485 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms