RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CCDC110Q8TBZ0 833 aa22.38■■□□□ 1.17
CCDC9-204ENST00000599398 GLYATL1Q969I3 302 aa22.38■■□□□ 1.17
CCDC9-204ENST00000599398 HES6Q96HZ4 224 aa22.38■■□□□ 1.17
CCDC9-204ENST00000599398 OR2AG1Q9H205 316 aa22.38■■□□□ 1.17
CCDC9-204ENST00000599398 RMI1Q9H9A7 625 aa22.38■■□□□ 1.17
CCDC9-204ENST00000599398 ATXN10Q9UBB4 475 aa22.38■■□□□ 1.17
CCDC9-204ENST00000599398 PCYT1BQ9Y5K3 369 aaPredicted RBP22.38■■□□□ 1.17
CCDC9-204ENST00000599398 TLX3O43711 291 aaPredicted RBP22.37■■□□□ 1.17
CCDC9-204ENST00000599398 ACP5P13686 325 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 HMGCLP35914 325 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 LSSP48449 732 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 PDX1P52945 283 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 LSMEM2Q8N112 164 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 TTC30BQ8N4P2 665 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 HNRNPLLQ8WVV9 542 aaKnown RBP22.37■■□□□ 1.17
CCDC9-204ENST00000599398 SPATA13Q96N96 652 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 PLEKHG4BQ96PX9 1271 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 GORASP1Q9BQQ3 440 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 FOXP3Q9BZS1 431 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 CARD9Q9H257 536 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 EPB41L5Q9HCM4 733 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 ATXN7L1Q9ULK2 861 aaPredicted RBP22.37■■□□□ 1.17
CCDC9-204ENST00000599398 KCNK6Q9Y257 313 aa22.37■■□□□ 1.17
CCDC9-204ENST00000599398 AAR2Q9Y312 384 aaKnown RBP22.37■■□□□ 1.17
CCDC9-204ENST00000599398 CHD6Q8TD26 2715 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 GRID2O43424 1007 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 BUD23O43709 281 aaKnown RBP22.36■■□□□ 1.17
CCDC9-204ENST00000599398 NUAK1O60285 661 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 ZNF189O75820 626 aaPredicted RBP22.36■■□□□ 1.17
CCDC9-204ENST00000599398 ZNF8P17098 575 aaPredicted RBP22.36■■□□□ 1.17
CCDC9-204ENST00000599398 ALDH4A1P30038 563 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 TBC1D25Q3MII6 688 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 AMZ1Q400G9 498 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 B3GNT8Q7Z7M8 397 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 C17orf82Q86X59 251 aaPredicted RBP22.36■■□□□ 1.17
CCDC9-204ENST00000599398 FGF11Q92914 225 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 APOL2Q9BQE5 337 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 TRIM39Q9HCM9 518 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 PKP3Q9Y446 797 aa22.36■■□□□ 1.17
CCDC9-204ENST00000599398 TRBV23OR9-2A0A075B6M9 112 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 ZW10O43264 779 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 SPAM1P38567 509 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 INHBCP55103 352 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 OR1D5P58170 312 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 OLIG2Q13516 323 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 SEL1L2Q5TEA6 688 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 ZDHHC20Q5W0Z9 365 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 CRTC3Q6UUV7 619 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 ADGRG6Q86SQ4 1221 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 GDAP1Q8TB36 358 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 TMEM74Q96NL1 305 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 IL17CQ9P0M4 197 aa22.35■■□□□ 1.17
CCDC9-204ENST00000599398 ADAMTS20P59510 1910 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 CCDC187A0A096LP49 1063 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 A0A1W2PNU3 283 aaPredicted RBP22.34■■□□□ 1.17
CCDC9-204ENST00000599398 TCRBV7S2A1N4TA0A589 114 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 TMX2-CTNND1H3BSU7 103 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 SNX2O60749 519 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 MTX2O75431 263 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 RBMS1P29558 406 aaKnown RBP22.34■■□□□ 1.17
CCDC9-204ENST00000599398 B4GALNT1Q00973 533 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 KLF1Q13351 362 aaPredicted RBP22.34■■□□□ 1.17
CCDC9-204ENST00000599398 MAP9Q49MG5 647 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 ATP13A5Q4VNC0 1218 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 ARHGEF18Q6ZSZ5 1173 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 FAM71DQ8N9W8 422 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 WDR36Q8NI36 951 aaKnown RBP22.34■■□□□ 1.17
CCDC9-204ENST00000599398 ZNF578Q96N58 590 aaPredicted RBP22.34■■□□□ 1.17
CCDC9-204ENST00000599398 PPP1R2P1Q96PQ5 205 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 STRADBQ9C0K7 418 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 IL26Q9NPH9 171 aa22.34■■□□□ 1.17
CCDC9-204ENST00000599398 R3HDM2Q9Y2K5 976 aaKnown RBP22.34■■□□□ 1.17
CCDC9-204ENST00000599398 FAM208BQ5VWN6 2430 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 A0A087WV48 116 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 GPR89AB7ZAQ6 455 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 STX7O15400 261 aaKnown RBP22.33■■□□□ 1.17
CCDC9-204ENST00000599398 RRP8O43159 456 aaKnown RBP22.33■■□□□ 1.17
CCDC9-204ENST00000599398 CCDC175P0C221 793 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 GPR89BP0CG08 455 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 EIF2S3P41091 472 aaKnown RBP22.33■■□□□ 1.17
CCDC9-204ENST00000599398 PLA2G4EQ3MJ16 856 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 FAM151BQ6UXP7 276 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 LRRC69Q6ZNQ3 347 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 ZNF438Q7Z4V0 828 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 LRRC8AQ8IWT6 810 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 SNIP1Q8TAD8 396 aaKnown RBP22.33■■□□□ 1.17
CCDC9-204ENST00000599398 SLC37A2Q8TED4 501 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 LRRC45Q96CN5 670 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 VPS35Q96QK1 796 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 OSGEPL1Q9H4B0 414 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 LZTFL1Q9NQ48 299 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.33■■□□□ 1.17
CCDC9-204ENST00000599398 TBC1D29Q9UFV1 150 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 LHX6Q9UPM6 363 aa22.33■■□□□ 1.17
CCDC9-204ENST00000599398 GLYATL1P3A0A0U1RQE8 302 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 PMS2P1A4D2B8 440 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 C5orf60A6NFR6 353 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 AGRPO00253 132 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 PPM1DO15297 605 aa22.32■■□□□ 1.16
CCDC9-204ENST00000599398 B4GAT1O43505 415 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms