RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 VPS26AO75436 327 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 SIX3O95343 332 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 CD1EP15812 388 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 RAD51Q06609 339 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 CARD16Q5EG05 197 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 ELMSAN1Q6PJG2 1045 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 CUZD1Q86UP6 607 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 PTGR2Q8N8N7 351 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 CD200R1Q8TD46 325 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 SORCS1Q8WY21 1168 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 SUV39H2Q9H5I1 410 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 FIS1Q9Y3D6 152 aa16.92■□□□□ 0.3
SHKBP1-216ENST00000598201 MEI4A8MW99 385 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 PFDN6O15212 129 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 SMIM24O75264 130 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 SUPT7LO94864 414 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 TPBGLP0DKB5 382 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 GM2AP17900 193 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 UGT1A6P19224 532 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 UGT1A1P22309 533 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 UGT1A4P22310 534 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 UGT1A3P35503 534 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 UGT1A5P35504 534 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 ADARP55265 1226 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 HERVK_113P63132 956 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 ADAM15Q13444 863 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 TSNQ15631 228 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 PFKFB4Q16877 469 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 METTL21CQ5VZV1 264 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 CRTC1Q6UUV9 634 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 SERPINA9Q86WD7 417 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 PCDH20Q8N6Y1 951 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 GRIN3AQ8TCU5 1115 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 RSPRY1Q96DX4 576 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 TUBGCP5Q96RT8 1024 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 BOCQ9BWV1 1114 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 ERVK-6Q9BXR3 956 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 SCN8AQ9UQD0 1980 aa16.91■□□□□ 0.3
SHKBP1-216ENST00000598201 NPEPPSL1A6NEC2 478 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 KERAO60938 352 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 ESR1P03372 595 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 UGT2B4P06133 528 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 PYGLP06737 847 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 TCF3P15923 654 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CHRM3P20309 590 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CD9P21926 228 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CDH13P55290 713 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 NFATC2Q13469 925 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 GEN1Q17RS7 908 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 TMEM198Q66K66 360 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 TMEM184AQ6ZMB5 413 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 KIAA0907Q7Z7F0 614 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 TMPRSS6Q8IU80 811 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 EEF1AKMT1Q8WVE0 214 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 KCNJ9Q92806 393 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 LYSMD1Q96S90 227 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CPEB1Q9BZB8 566 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CEP44Q9C0F1 390 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 DENND2DQ9H6A0 471 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 ASB8Q9H765 288 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CD248Q9HCU0 757 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 SARS2Q9NP81 518 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 MARK1Q9P0L2 795 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 TRMT6Q9UJA5 497 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 G3BP2Q9UN86 482 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 PLA2G4CQ9UP65 541 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CDYLQ9Y232 598 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CCDC189A1A4V9 331 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 PPP6CO00743 305 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 ZNF197O14709 1029 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 PRMT5O14744 637 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 ECI2O75521 394 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 SKAP2O75563 359 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 SNUPNO95149 360 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 POP4O95707 220 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 WEE1P30291 646 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CPOXP36551 454 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CLCN7P51798 805 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 KLF10Q13118 480 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CHRNA6Q15825 494 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 EML3Q32P44 896 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 LRRC73Q5JTD7 316 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 TRIM68Q6AZZ1 485 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 TMC5Q6UXY8 1006 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 EP400NLQ6ZTU2 488 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CPNE9Q8IYJ1 553 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 STK40Q8N2I9 435 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 OR2A12Q8NGT7 310 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 STAG3L4Q8TBR4 150 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 AGAP11Q8TF27 550 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CYB5D2Q8WUJ1 264 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 SMG7Q92540 1137 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 FUBP1Q96AE4 644 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 SCRN2Q96FV2 425 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 PIDD1Q9HB75 910 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 EML4Q9HC35 981 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 CLDND1Q9NY35 253 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 RNF112Q9ULX5 631 aa16.9■□□□□ 0.3
SHKBP1-216ENST00000598201 GOLGA8CPA6NN73 597 aa16.89■□□□□ 0.29
SHKBP1-216ENST00000598201 BTN3A1O00481 513 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 336.5 ms