RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 CD3EAPO15446 510 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 SYNCRIPO60506 623 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 SNX2O60749 519 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 SERPINB7O75635 380 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 C1RP00736 705 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 HOXC13P31276 330 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 POLR2JP52435 117 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 ARSFP54793 590 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 SIRPB2Q5JXA9 342 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 LDLRAP1Q5SW96 308 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 MANEALQ5VSG8 457 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 ANKS6Q68DC2 871 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 GLYATQ6IB77 296 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 LRRC49Q8IUZ0 686 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 CHPT1Q8WUD6 406 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 TRUB1Q8WWH5 349 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 SNX19Q92543 992 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 PALMDQ9NP74 551 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 SLC52A3Q9NQ40 469 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 ABCC13Q9NSE7 274 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 LTBP3Q9NS15 1303 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 ASPDHA6ND91 283 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 MROH6A6NGR9 719 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 CLPXO76031 633 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 GOT2P00505 430 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 HOXD8P13378 290 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 EEFSECP57772 596 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 TAF2Q6P1X5 1199 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 SPATA19Q7Z5L4 167 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 PAPD5Q8NDF8 572 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 TSPEARQ8WU66 669 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 CNDP2Q96KP4 475 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 LHPPQ9H008 270 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 FAM50BQ9Y247 325 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 HS3ST4Q9Y661 456 aa17.28■□□□□ 0.36
ARHGEF1-213ENST00000595897 DEAF1O75398 565 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 IGLV3-25P01717 112 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 HTR7P34969 479 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 ARL1P40616 181 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 PROSER1Q86XN7 944 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 TMEM199Q8N511 208 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 HMCESQ96FZ2 354 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 CCDC138Q96M89 665 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 ATOH8Q96SQ7 321 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 PAAF1Q9BRP4 392 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 RAD21L1Q9H4I0 556 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 ATP13A1Q9HD20 1204 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 GMIPQ9P107 970 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 SEPT3Q9UH03 358 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 MAGED1Q9Y5V3 778 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 ARL5AQ9Y689 179 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 MYLKQ15746 1914 aa17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 ZFC3H1O60293 1989 aaKnown RBP17.27■□□□□ 0.36
ARHGEF1-213ENST00000595897 TRIM64BA6NI03 449 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 EEDO75530 441 aaKnown RBP17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 SHMT2P34897 504 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 ALDH3A2P51648 485 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 OR4D2P58180 307 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 TRIM16LQ309B1 348 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 NCCRP1Q6ZVX7 275 aaPredicted RBP17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 TMCO5AQ8N6Q1 288 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 RHEBL1Q8TAI7 183 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 STAG3L4Q8TBR4 150 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 LPPQ93052 612 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 AIG1Q9NVV5 245 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 PCDHGA11Q9Y5H2 935 aa17.27■□□□□ 0.35
ARHGEF1-213ENST00000595897 IQCA1LA6NCM1 817 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 SEC14L2O76054 403 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 PIRTP0C851 137 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 THRBP10828 461 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 NR4A1P22736 598 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 HRH2P25021 359 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 TIGD5Q53EQ6 642 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 NIPAL1Q6NVV3 410 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 R3HCC1LQ7Z5L2 792 aaKnown RBP17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 DEFB132Q7Z7B7 95 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 TMBIM1Q969X1 311 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 SDCCAG3Q96C92 435 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 DGCR6LQ9BY27 220 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 LRRC3Q9BY71 257 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 ABHD16BQ9H3Z7 469 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 TFB2MQ9H5Q4 396 aaKnown RBP17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 INIPQ9NRY2 104 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 ERGIC3Q9Y282 383 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 LDB2O43679 373 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 ABCB7O75027 752 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 RHOBTB1O94844 696 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 F2P00734 622 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 IL7RP16871 459 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 NFKBIAP25963 317 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 PRDX3P30048 256 aaKnown RBP17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 PGFP49763 221 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 CRYBB1P53674 252 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 MFSD10Q14728 455 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 RBBP7Q16576 425 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 CYP2A13Q16696 494 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 THAP5Q7Z6K1 395 aa17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 C8orf59Q8N0T1 100 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF1-213ENST00000595897 FNDC5Q8NAU1 212 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms