RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PRUNE1Q86TP1 453 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 GALNT13Q8IUC8 556 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 NAGSQ8N159 534 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 CACTIN-AS1Q8N1I8 211 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 TAB3Q8N5C8 712 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 KDF1Q8NAX2 398 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 NAT6Q93015 286 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 CCDC74AQ96AQ1 378 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 VPS35Q96QK1 796 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 TBL1YQ9BQ87 522 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 CCDC3Q9BQI4 270 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 GSDMCQ9BYG8 508 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 FRMD8P1Q9BZ68 369 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 OR2AG1Q9H205 316 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 DPEP2Q9H4A9 486 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 ARNT2Q9HBZ2 717 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 RAD18Q9NS91 495 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 EVA1BQ9NVM1 165 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 CLCA2Q9UQC9 943 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 GPSM3Q9Y4H4 160 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 PCDHB1Q9Y5F3 818 aa10.88□□□□□ -0.67
SHKBP1-206ENST00000595523 AHCTF1Q8WYP5 2266 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 A0A1W2PQM1 296 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 TAF4O00268 1085 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 NTN3O00634 580 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 CHUKO15111 745 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 NUAK1O60285 661 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 SLC25A14O95258 325 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 FGGP02679 453 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 ETS1P14921 441 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 SPAM1P38567 509 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 ACTR1BP42025 376 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 TNNT3P45378 269 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 ZNF140P52738 457 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 MAZP56270 477 aaKnown RBP10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 ACTR1AP61163 376 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 SNX1Q13596 522 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 LRP8Q14114 963 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 PRPSAP1Q14558 356 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 TAF1AQ15573 450 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 CHRNA6Q15825 494 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 ST3GAL2Q16842 350 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 KCTD19Q17RG1 926 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 P3H1Q32P28 736 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 C14orf28Q4W4Y0 310 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 FAM151BQ6UXP7 276 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 MICALCLQ6ZW33 695 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 PHYKPLQ8IUZ5 450 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 ZNF547Q8IVP9 402 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 MDM1Q8TC05 714 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 DTX3LQ8TDB6 740 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 ZDHHC1Q8WTX9 485 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 PPP1R2P1Q96PQ5 205 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 TRIM39Q9HCM9 518 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 ZNHIT2Q9UHR6 403 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 RNF215Q9Y6U7 377 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 PTPRQQ9UMZ3 2332 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 IGSF10Q6WRI0 2623 aa10.87□□□□□ -0.67
SHKBP1-206ENST00000595523 GLYATL1P3A0A0U1RQE8 302 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 A0A1W2PNU3 283 aaPredicted RBP10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 A6NCN8 305 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 TMEM8BA6NDV4 472 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 PRR19A6NJB7 356 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 LDB2O43679 373 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 UGT1A9O60656 530 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 CSO75390 466 aaKnown RBP10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 ECEL1O95672 775 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 AP2A1O95782 977 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 ACP5P13686 325 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 GLB1P16278 677 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 UGT1A6P19224 532 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 LPOP22079 712 aaPredicted RBP10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 UGT1A1P22309 533 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 UGT1A4P22310 534 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 STIP1P31948 543 aaKnown RBP10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 UGT1A3P35503 534 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 UGT1A5P35504 534 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 XIAPP98170 497 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 CCNG2Q16589 344 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 DRICH1Q6PGQ1 229 aaPredicted RBP10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 CHST15Q7LFX5 561 aaPredicted RBP10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 ZNF438Q7Z4V0 828 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 C11orf96Q7Z7L8 435 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 OR4K2Q8NGD2 314 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 OR13C4Q8NGS5 318 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 BRSK1Q8TDC3 778 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 ZCCHC14Q8WYQ9 949 aaKnown RBP10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 ABCG4Q9H172 646 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 LRRC40Q9H9A6 602 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 RMI1Q9H9A7 625 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 UGT1A7Q9HAW7 530 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 UGT1A10Q9HAW8 530 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 UGT1A8Q9HAW9 530 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 PIH1D1Q9NWS0 290 aaKnown RBP10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 TBC1D29Q9UFV1 150 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 SLC23A2Q9UGH3 650 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 FKBPLQ9UIM3 349 aa10.86□□□□□ -0.67
SHKBP1-206ENST00000595523 APPL1Q9UKG1 709 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms