RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ARFGAP3Q9NP61 516 aa22.36■■□□□ 1.17
SNRNP70-204ENST00000595231 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.36■■□□□ 1.171e-6■□□□□ 9.5
SNRNP70-204ENST00000595231 SNX11Q9Y5W9 270 aa22.36■■□□□ 1.17
SNRNP70-204ENST00000595231 OAS3Q9Y6K5 1087 aaKnown RBP22.36■■□□□ 1.17
SNRNP70-204ENST00000595231 V9GYY5 206 aaPredicted RBP22.36■■□□□ 1.17
SNRNP70-204ENST00000595231 TP53BP1Q12888 1972 aaPredicted RBP22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 ADAMTS9Q9P2N4 1935 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 SLC25A14O95258 325 aaPredicted RBP22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 TTC4O95801 387 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 ZNF806P0C7X5 589 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 ITGALP20701 1170 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 CACNG1Q06432 222 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 KHDC1Q4VXA5 237 aaKnown RBP22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 ZRANB3Q5FWF4 1079 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 STEAP4Q687X5 459 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 KCTD16Q68DU8 428 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 AFTPHQ6ULP2 937 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 MACC1Q6ZN28 852 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 UNC5AQ6ZN44 842 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 CCDC25Q86WR0 208 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 PNPLA1Q8N8W4 532 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 FMO2Q99518 471 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 IL1RAPL1Q9NZN1 696 aa22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 MTRF1LQ9UGC7 380 aaKnown RBP22.35■■□□□ 1.17
SNRNP70-204ENST00000595231 FUCA1P04066 466 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 PAMP19021 973 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 TGM1P22735 817 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 SPEM2Q0P670 501 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 GRIK2Q13002 908 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 PTK2BQ14289 1009 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 ERCC6LQ2NKX8 1250 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 ZNF648Q5T619 568 aaPredicted RBP22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 ASCL5Q7RTU5 278 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 UNC5BQ8IZJ1 945 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 PYROXD1Q8WU10 500 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 UBXN4Q92575 508 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 MARCH4Q9P2E8 410 aaPredicted RBP22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 NCDNQ9UBB6 729 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 TMEM98Q9Y2Y6 226 aa22.34■■□□□ 1.17
SNRNP70-204ENST00000595231 GOLGA8KD6RF30 607 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 GOLGA8TH3BQL2 631 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 KHNYNO15037 678 aaKnown RBP22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 CEACAM5P06731 702 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 HTR1BP28222 390 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 MAGEA4P43358 317 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 POLD2P49005 469 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 EIF2B5Q13144 721 aaKnown RBP22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 SPANXN3Q5MJ09 141 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 GPRC6AQ5T6X5 926 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 ENPP7Q6UWV6 458 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 PHYKPLQ8IUZ5 450 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 NXPE1Q8N323 547 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 DCLK2Q8N568 766 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 EIF1ADQ8N9N8 165 aaKnown RBP22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.33■■□□□ 1.173e-13■■■■■ 36.2
SNRNP70-204ENST00000595231 DDHD1Q8NEL9 900 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 RUBCNQ92622 972 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 CFAP36Q96G28 342 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 WDR92Q96MX6 357 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 CAAP1Q9H8G2 361 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 TRIM39Q9HCM9 518 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 FGF22Q9HCT0 170 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 SLC17A4Q9Y2C5 497 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 TMEM131Q92545 1883 aa22.33■■□□□ 1.17
SNRNP70-204ENST00000595231 ZFHX2Q9C0A1 2572 aaPredicted RBP22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 ARHGAP33O14559 1287 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 MTX2O75431 263 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 MYBL2P10244 700 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 SEMA3AQ14563 771 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 LONRF1Q17RB8 773 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 PRAMEF14Q5SWL7 426 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 SERPINA9Q86WD7 417 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 RELL1Q8IUW5 271 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 OR56A4Q8NGH8 313 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 CCDC97Q96F63 343 aaPredicted RBP22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 NUSAP1Q9BXS6 441 aaKnown RBP22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 ERVMER34-1Q9H9K5 563 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 PARD6AQ9NPB6 346 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 SEMA4GQ9NTN9 838 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 ATXN10Q9UBB4 475 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 KLF15Q9UIH9 416 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 CRLS1Q9UJA2 301 aa22.33■■□□□ 1.16
SNRNP70-204ENST00000595231 CD3EAPO15446 510 aaKnown RBP22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 LRP3O75074 770 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 KELP23276 732 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 ACRV1P26436 265 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 TNFRSF8P28908 595 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 SF3A2Q15428 464 aaKnown RBP22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 SMAD1Q15797 465 aaKnown RBP22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 LDLRAP1Q5SW96 308 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 TAS2R42Q7RTR8 314 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 ADGRG6Q86SQ4 1221 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 PARGQ86W56 976 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 ULK4Q96C45 1275 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 C9orf72Q96LT7 481 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 TSPYL1Q9H0U9 437 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 MRPL40Q9NQ50 206 aaKnown RBP22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 CATSPERZQ9NTU4 200 aa22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 EP300Q09472 2414 aaPredicted RBP22.32■■□□□ 1.16
SNRNP70-204ENST00000595231 LNP1A1A4G5 178 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms