RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 CKMT1AP12532 417 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 BASP1P80723 227 aaKnown RBP15.22■□□□□ 0.03
USE1-206ENST00000595101 DAB2P98082 770 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 PEX6Q13608 980 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 ZCCHC8Q6NZY4 707 aaKnown RBP15.22■□□□□ 0.03
USE1-206ENST00000595101 CCDC137Q6PK04 289 aaKnown RBP15.22■□□□□ 0.03
USE1-206ENST00000595101 SLC30A9Q6PML9 568 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 DNAAF3Q8N9W5 541 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 FAM181AQ8N9Y4 354 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 KYQ8NBH2 561 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 FAM46DQ8NEK8 389 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 GPBAR1Q8TDU6 330 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 PATE1Q8WXA2 126 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 ZNF778Q96MU6 729 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 SCNM1Q9BWG6 230 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 CDH19Q9H159 772 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 FAM96AQ9H5X1 160 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 HOMER3Q9NSC5 361 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 KLK13Q9UKR3 277 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 NEU2Q9Y3R4 380 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 AKAP13Q12802 2813 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 CELSR3Q9NYQ7 3312 aa15.22■□□□□ 0.03
USE1-206ENST00000595101 GOLGA4Q13439 2230 aaKnown RBP15.22■□□□□ 0.03
USE1-206ENST00000595101 CPED1A4D0V7 1026 aa15.21■□□□□ 0.03
USE1-206ENST00000595101 CES2O00748 559 aa15.21■□□□□ 0.03
USE1-206ENST00000595101 TCP1P17987 556 aaKnown RBP15.21■□□□□ 0.03
USE1-206ENST00000595101 ACP1P24666 158 aa15.21■□□□□ 0.03
USE1-206ENST00000595101 LMAN1P49257 510 aa15.21■□□□□ 0.03
USE1-206ENST00000595101 CDKN1CP49918 316 aaPredicted RBP15.21■□□□□ 0.03
USE1-206ENST00000595101 SEPT6Q14141 434 aa15.21■□□□□ 0.03
USE1-206ENST00000595101 HS1BP3Q53T59 392 aa15.21■□□□□ 0.03
USE1-206ENST00000595101 CHST15Q7LFX5 561 aaPredicted RBP15.21■□□□□ 0.03
USE1-206ENST00000595101 RAB44Q7Z6P3 723 aaPredicted RBP15.21■□□□□ 0.03
USE1-206ENST00000595101 GKN2Q86XP6 184 aa15.21■□□□□ 0.03
USE1-206ENST00000595101 RAD18Q9NS91 495 aa15.21■□□□□ 0.03
USE1-206ENST00000595101 APOBEC2Q9Y235 224 aaKnown RBP15.21■□□□□ 0.03
USE1-206ENST00000595101 CTAGE9A4FU28 777 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 FAM149AA5PLN7 773 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 B4DGG1 531 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 PSMD3O43242 534 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 NUAK1O60285 661 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 PRAMEF1O95521 474 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 CRTAMO95727 393 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 EML2O95834 649 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 KRT14P02533 472 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 ARSDP51689 593 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 CRADDP78560 199 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 GPS1Q13098 491 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 PERM1Q5SV97 790 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 ANKRD22Q5VYY1 191 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 CRTC3Q6UUV7 619 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 PPP1R21Q6ZMI0 780 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 ZNF547Q8IVP9 402 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 GDAP1Q8TB36 358 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 ZNF398Q8TD17 642 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 ADAMTS14Q8WXS8 1223 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 OR2M4Q96R27 311 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 DDX47Q9H0S4 455 aaKnown RBP15.21■□□□□ 0.02
USE1-206ENST00000595101 DPEP2Q9H4A9 486 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 TRIM39Q9HCM9 518 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 CASS4Q9NQ75 786 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 TRNAU1APQ9NX07 287 aaKnown RBP15.21■□□□□ 0.02
USE1-206ENST00000595101 TAAR2Q9P1P5 351 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 VPS18Q9P253 973 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 SLC23A2Q9UGH3 650 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 SLC2A6Q9UGQ3 507 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 RABGEF1Q9UJ41 708 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 SAR1BQ9Y6B6 198 aa15.21■□□□□ 0.02
USE1-206ENST00000595101 COL5A1P20908 1838 aaPredicted RBP15.21■□□□□ 0.02
USE1-206ENST00000595101 SCN8AQ9UQD0 1980 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 ERI2A8K979 691 aaKnown RBP15.2■□□□□ 0.02
USE1-206ENST00000595101 NOBOXO60393 691 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 PHF2O75151 1096 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 RFPL3O75679 317 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 SRP72O76094 671 aaKnown RBP15.2■□□□□ 0.02
USE1-206ENST00000595101 DEKP35659 375 aaKnown RBP15.2■□□□□ 0.02
USE1-206ENST00000595101 ACTR1BP42025 376 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 ACTR1AP61163 376 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 CDH17Q12864 832 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 PLA2G4EQ3MJ16 856 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 PDPK2PQ6A1A2 396 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 ZNF534Q76KX8 674 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 LINC00523Q86TU6 105 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 GALNT13Q8IUC8 556 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 PHYKPLQ8IUZ5 450 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 VPS35Q96QK1 796 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 NAP1L3Q99457 506 aaPredicted RBP15.2■□□□□ 0.02
USE1-206ENST00000595101 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.2■□□□□ 0.02
USE1-206ENST00000595101 KCNK6Q9Y257 313 aa15.2■□□□□ 0.02
USE1-206ENST00000595101 CEP295Q9C0D2 2601 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 TRBV23OR9-2A0A075B6M9 112 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 EME2A4GXA9 379 aaPredicted RBP15.19■□□□□ 0.02
USE1-206ENST00000595101 MROH6A6NGR9 719 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 OR51F1A6NGY5 319 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 GRID2O43424 1007 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 PPFIA2O75334 1257 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 CDK14O94921 469 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 ACP5P13686 325 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 CTSCP53634 463 aa15.19■□□□□ 0.02
USE1-206ENST00000595101 TMEM115Q12893 351 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms