RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 TSC22D4Q9Y3Q8 395 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 MTF2Q9Y483 593 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 PCDHGC4Q9Y5F7 938 aa16.99■□□□□ 0.31
SHKBP1-205ENST00000594973 A0A087X1B8 175 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 TRIM64CA6NLI5 447 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 TMEM114B3SHH9 223 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 TARM1B6A8C7 271 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 NDST3O95803 873 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 EPOP01588 193 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 EIF2S1P05198 315 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 CLCN5P51795 746 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 FLOT2Q14254 428 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 KCTD21Q4G0X4 260 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 ALG1LQ6GMV1 187 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 C16orf89Q6UX73 402 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 CHST9Q7L1S5 443 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 CARM1Q86X55 608 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 HERC6Q8IVU3 1022 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 TCEAL8Q8IYN2 117 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 CCNYL1Q8N7R7 359 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 PDCD6IPQ8WUM4 868 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 TRIB3Q96RU7 358 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 CDH19Q9H159 772 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 COPS7BQ9H9Q2 264 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 EPS15L1Q9UBC2 864 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 SLC8A2Q9UPR5 921 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 SPO11Q9Y5K1 396 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 GLP2RO95838 553 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 S1PR4O95977 384 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 TIMP1P01033 207 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 TFPTP0C1Z6 253 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 HDCP19113 662 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 MZF1P28698 734 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 CDKN2DP55273 166 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 ARL13AQ5H913 290 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 PIM3Q86V86 326 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 LILRA2Q8N149 483 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 SH3RF2Q8TEC5 729 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 ZNF597Q96LX8 424 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 MRPL46Q9H2W6 279 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 IGSF5Q9NSI5 407 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 CPQQ9Y646 472 aa16.98■□□□□ 0.31
SHKBP1-205ENST00000594973 NEMP2A6NFY4 417 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 CD3EAPO15446 510 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 H2AFYO75367 372 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 INHBBP09529 407 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 PRSS56P0CW18 603 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 NCF2P19878 526 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 PPP3CCP48454 512 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 RPS3AP61247 264 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 MRPS22P82650 360 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 ARF5P84085 180 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 CYP4F8P98187 520 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 INAQ16352 499 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 FAM83EQ2M2I3 478 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 ARMCX6Q7L4S7 300 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 CMTR2Q8IYT2 770 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 GALNT4Q8N4A0 578 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 EFCAB3Q8N7B9 438 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 TERB1Q8NA31 727 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 ADAMTS16Q8TE57 1224 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 THAP11Q96EK4 314 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 RMND5BQ96G75 393 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 DRC3Q9H069 523 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 ILKAPQ9H0C8 392 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 RETREG1Q9H6L5 497 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 VWA7Q9Y334 891 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 PIGNO95427 931 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 ZBTB11O95625 1053 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 F11P03951 625 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 ZNF26P17031 533 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 SEMA3AQ14563 771 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 SLC9B1Q4ZJI4 515 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 NANOGNBQ7Z5D8 188 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 TMEM102Q8N9M5 508 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 LPCAT1Q8NF37 534 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 ZNF420Q8TAQ5 688 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 MAPK15Q8TD08 544 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 ANKRD49Q8WVL7 239 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 PKP2Q99959 881 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 MRPL57Q9BQC6 102 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 CYP4F12Q9HCS2 524 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 GIN1Q9NXP7 522 aa16.97■□□□□ 0.31
SHKBP1-205ENST00000594973 LOC100653049A0A140TA62 436 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 K7EPI3 171 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 CNOT3O75175 753 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 RPP40O75818 363 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 KRT34O76011 436 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 CR2P20023 1033 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 GABRR2P28476 465 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 PTPRRQ15256 657 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 METTL21CQ5VZV1 264 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 GLT6D1Q7Z4J2 308 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 CLVS1Q8IUQ0 354 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 TXNDC5Q8NBS9 432 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 ADAMTS19Q8TE59 1207 aa16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 EFHD2Q96C19 240 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 C12orf43Q96C57 262 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 TDRD1Q9BXT4 1180 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-205ENST00000594973 C11orf49Q9H6J7 331 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms