RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 KLHL8Q9P2G9 620 aaPredicted RBP23.24■■□□□ 1.31
LSM4-204ENST00000594828 ATXN10Q9UBB4 475 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 FAM153AQ9UHL3 310 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 ACSL6Q9UKU0 697 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 KCNK6Q9Y257 313 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 PTPRQQ9UMZ3 2332 aa23.24■■□□□ 1.31
LSM4-204ENST00000594828 IGHV5-10-1A0A0J9YXX1 117 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 TK2O00142 265 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 EML2O95834 649 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 ACP5P13686 325 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 NFKB1P19838 968 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 MAPK10P53779 464 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 SQSTM1Q13501 440 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 C16orf72Q14CZ0 275 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 PDPK2PQ6A1A2 396 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 PID1Q7Z2X4 250 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 SLC39A7Q92504 469 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 KRT35Q92764 455 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 VAT1Q99536 393 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 SLC38A3Q99624 504 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 RBSNQ9H1K0 784 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 OR2AG1Q9H205 316 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 WDR70Q9NW82 654 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 NFKBIL1Q9UBC1 381 aaPredicted RBP23.23■■□□□ 1.31
LSM4-204ENST00000594828 TBC1D29Q9UFV1 150 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 SPO11Q9Y5K1 396 aa23.23■■□□□ 1.31
LSM4-204ENST00000594828 LOC400499M0QZD8 3231 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 IGSF10Q6WRI0 2623 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 LOC285095A0A1B0GVY8 99 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 SOWAHDA6NJG2 315 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 NDUFA10O95299 355 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 ZNF8P17098 575 aaPredicted RBP23.22■■□□□ 1.31
LSM4-204ENST00000594828 BPIP17213 487 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 ETV5P41161 510 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 TNNT3P45378 269 aaPredicted RBP23.22■■□□□ 1.31
LSM4-204ENST00000594828 LIMK2P53671 638 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 WNT3AP56704 352 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 GPLD1P80108 840 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 PPP2R5EQ16537 467 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 ZNF648Q5T619 568 aaPredicted RBP23.22■■□□□ 1.31
LSM4-204ENST00000594828 IYDQ6PHW0 289 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 TMTC1Q8IUR5 882 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 ZNF567Q8N184 647 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 RCBTB1Q8NDN9 531 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 OR4D9Q8NGE8 314 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 HTR3CQ8WXA8 447 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 USP7Q93009 1102 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 GLYATL1Q969I3 302 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 DPYSL5Q9BPU6 564 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 HEMGNQ9BXL5 484 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 BPTFQ12830 3046 aa23.22■■□□□ 1.31
LSM4-204ENST00000594828 HACD1B0YJ81 288 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 GPR89AB7ZAQ6 455 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 HGSO14964 777 aaPredicted RBP23.21■■□□□ 1.31
LSM4-204ENST00000594828 AURKAO14965 403 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 SNX2O60749 519 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 IPO7O95373 1038 aaKnown RBP23.21■■□□□ 1.31
LSM4-204ENST00000594828 EPOP01588 193 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 GPR89BP0CG08 455 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 PPM1FP49593 454 aaPredicted RBP23.21■■□□□ 1.31
LSM4-204ENST00000594828 HHEXQ03014 270 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 TRA2AQ13595 282 aaKnown RBP eCLIP23.21■■□□□ 1.31
LSM4-204ENST00000594828 KDELC1Q6UW63 502 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 CCDC81Q6ZN84 652 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 BBS12Q6ZW61 710 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 ZNF761Q86XN6 746 aaPredicted RBP23.21■■□□□ 1.31
LSM4-204ENST00000594828 SNRNP27Q8WVK2 155 aaKnown RBP23.21■■□□□ 1.31
LSM4-204ENST00000594828 AHCYL2Q96HN2 611 aaKnown RBP23.21■■□□□ 1.31
LSM4-204ENST00000594828 CALR3Q96L12 384 aaKnown RBP23.21■■□□□ 1.31
LSM4-204ENST00000594828 CCDC74BQ96LY2 380 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 FCRL5Q96RD9 977 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 CCNL2Q96S94 520 aaPredicted RBP23.21■■□□□ 1.31
LSM4-204ENST00000594828 STN1Q9H668 368 aaKnown RBP23.21■■□□□ 1.31
LSM4-204ENST00000594828 BPIFA1Q9NP55 256 aa23.21■■□□□ 1.31
LSM4-204ENST00000594828 PRAMEF33A0A0G2JMD5 474 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 K7ENP7 123 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 PRAMEF10O60809 474 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 SLC2A4P14672 509 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 NAP1L1P55209 391 aaKnown RBP23.2■■□□□ 1.3
LSM4-204ENST00000594828 RHDQ02161 417 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 CFHR1Q03591 330 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.2■■□□□ 1.3
LSM4-204ENST00000594828 TMEM164Q5U3C3 297 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 INO80CQ6PI98 192 aaPredicted RBP23.2■■□□□ 1.3
LSM4-204ENST00000594828 ADGRG6Q86SQ4 1221 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 PHYKPLQ8IUZ5 450 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 OR10G6Q8NH81 332 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 SH3KBP1Q96B97 665 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 QKIQ96PU8 341 aaKnown RBP eCLIP23.2■■□□□ 1.3
LSM4-204ENST00000594828 HERPUD2Q9BSE4 406 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 TRABDQ9H4I3 376 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 SARS2Q9NP81 518 aaKnown RBP23.2■■□□□ 1.3
LSM4-204ENST00000594828 TRHDEQ9UKU6 1024 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 PCDHA3Q9Y5H8 950 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 ADGRG1Q9Y653 693 aa23.2■■□□□ 1.3
LSM4-204ENST00000594828 RCCD1A6NED2 376 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 OR5K4A6NMS3 321 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 F5H423 210 aaPredicted RBP23.19■■□□□ 1.3
LSM4-204ENST00000594828 APOC4-APOC2K7ER74 178 aa23.19■■□□□ 1.3
LSM4-204ENST00000594828 ERVH48-1M5A8F1 160 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms