RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 GAPDHSO14556 408 aaPredicted RBP25.51■■□□□ 1.67
TRIM28-204ENST00000594806 NUAK1O60285 661 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 DNAJC6O75061 913 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 SRP72O76094 671 aaKnown RBP25.51■■□□□ 1.67
TRIM28-204ENST00000594806 PRAMEF1O95521 474 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 GRIA1P42261 906 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 VPS41P49754 854 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 DUSP3P51452 185 aaPredicted RBP25.51■■□□□ 1.67
TRIM28-204ENST00000594806 SEPT6Q14141 434 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 KCNJ11Q14654 390 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 PTPRCAPQ14761 206 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 C6orf132Q5T0Z8 1188 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 LRRC8BQ6P9F7 803 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 TAF8Q7Z7C8 310 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 OR13C4Q8NGS5 318 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 ULK4Q96C45 1275 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 BOCQ9BWV1 1114 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 ZCCHC2Q9C0B9 1178 aaKnown RBP25.51■■□□□ 1.67
TRIM28-204ENST00000594806 IL22Q9GZX6 179 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 BFARQ9NZS9 450 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 FKBPLQ9UIM3 349 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 PCDHGA1Q9Y5H4 931 aa25.51■■□□□ 1.67
TRIM28-204ENST00000594806 SPAARA0A1B0GVQ0 90 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 AGAP14A8MT82 685 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 KIF2AO00139 706 aaPredicted RBP25.5■■□□□ 1.67
TRIM28-204ENST00000594806 TRIM16O95361 564 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 KCNA4P22459 653 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 ADCY8P40145 1251 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 XIAPP98170 497 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 ILKQ13418 452 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 DEFB133Q30KQ1 61 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 GPR33Q49SQ1 333 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 CERCAMQ5T4B2 595 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 MCUQ8NE86 351 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 DDHD1Q8NEL9 900 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 APOLD1Q96LR9 279 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 ASB8Q9H765 288 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 CAAP1Q9H8G2 361 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 PIH1D1Q9NWS0 290 aaKnown RBP25.5■■□□□ 1.67
TRIM28-204ENST00000594806 ATXN10Q9UBB4 475 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 TMPRSS11EQ9UL52 423 aa25.5■■□□□ 1.67
TRIM28-204ENST00000594806 ARHGEF17Q96PE2 2063 aaPredicted RBP25.49■■□□□ 1.67
TRIM28-204ENST00000594806 ZFC3H1O60293 1989 aaKnown RBP25.49■■□□□ 1.67
TRIM28-204ENST00000594806 CHUKO15111 745 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 CKMT1AP12532 417 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 ITGALP20701 1170 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 ACP1P24666 158 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 RPIAP49247 311 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 DAB2P98082 770 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 NFATC2Q13469 925 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 PTK6Q13882 451 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 PCID2Q5JVF3 399 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 SNX20Q7Z614 316 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 PCGF5Q86SE9 256 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 ADGRG6Q86SQ4 1221 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 PPHLN1Q8NEY8 458 aaKnown RBP25.49■■□□□ 1.67
TRIM28-204ENST00000594806 GDAP1Q8TB36 358 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 PTCD2Q8WV60 388 aaKnown RBP25.49■■□□□ 1.67
TRIM28-204ENST00000594806 CPT1BQ92523 772 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 CDKN2AIPNLQ96HQ2 116 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 DNAJC1Q96KC8 554 aaKnown RBP25.49■■□□□ 1.67
TRIM28-204ENST00000594806 C16orf45Q96MC5 204 aaPredicted RBP25.49■■□□□ 1.67
TRIM28-204ENST00000594806 TTC25Q96NG3 672 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 OR2AG1Q9H205 316 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.49■■□□□ 1.67
TRIM28-204ENST00000594806 ZNHIT2Q9UHR6 403 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 GPSM3Q9Y4H4 160 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 SLC30A1Q9Y6M5 507 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 DCHS1Q96JQ0 3298 aa25.49■■□□□ 1.67
TRIM28-204ENST00000594806 PLXNB3Q9ULL4 1909 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 GRID2O43424 1007 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 UGT1A9O60656 530 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 DKK1O94907 266 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 CDK14O94921 469 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 FTH1P19P0C7X4 201 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 MLNP12872 115 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 UGT1A6P19224 532 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 UGT1A1P22309 533 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 UGT1A4P22310 534 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 UGT1A3P35503 534 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 UGT1A5P35504 534 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 TMEM115Q12893 351 aaPredicted RBP25.48■■□□□ 1.67
TRIM28-204ENST00000594806 GTF2H3Q13889 308 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 DHX34Q14147 1143 aaKnown RBP25.48■■□□□ 1.67
TRIM28-204ENST00000594806 N4BP2L1Q5TBK1 243 aaPredicted RBP25.48■■□□□ 1.67
TRIM28-204ENST00000594806 MARK2Q7KZI7 788 aaKnown RBP25.48■■□□□ 1.67
TRIM28-204ENST00000594806 KLHL7Q8IXQ5 586 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 HEXDCQ8WVB3 486 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 UGT1A7Q9HAW7 530 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 UGT1A10Q9HAW8 530 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 UGT1A8Q9HAW9 530 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 XAB2Q9HCS7 855 aaKnown RBP25.48■■□□□ 1.67
TRIM28-204ENST00000594806 TCAF1Q9Y4C2 921 aa25.48■■□□□ 1.67
TRIM28-204ENST00000594806 CELA2BP08218 269 aaPredicted RBP25.47■■□□□ 1.67
TRIM28-204ENST00000594806 ZNF8P17098 575 aaPredicted RBP25.47■■□□□ 1.67
TRIM28-204ENST00000594806 PTGIRP43119 386 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 TMPRSS15P98073 1019 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 CTBSQ01459 385 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 DR1Q01658 176 aa25.47■■□□□ 1.67
TRIM28-204ENST00000594806 NR0B2Q15466 257 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms