RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CCDC153Q494R4 210 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 FBXO43Q4G163 708 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 RBFAQ8N0V3 343 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 KCTD4Q8WVF5 259 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 SCAMP4Q969E2 229 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 CCDC97Q96F63 343 aaPredicted RBP20.64■□□□□ 0.89
PNKP-203ENST00000593946 MKRN2Q9H000 416 aaKnown RBP20.64■□□□□ 0.89
PNKP-203ENST00000593946 GPAMQ9HCL2 828 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 SMOXQ9NWM0 555 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 DUSP12Q9UNI6 340 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 PCDHB1Q9Y5F3 818 aa20.64■□□□□ 0.89
PNKP-203ENST00000593946 GMNCA6NCL1 334 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 DNAJC6O75061 913 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 KLHL2O95198 593 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 ZNF7P17097 686 aaPredicted RBP20.63■□□□□ 0.89
PNKP-203ENST00000593946 DLG1Q12959 904 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 ACOX1Q15067 660 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 AGBL4Q5VU57 503 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 RGS9BPQ6ZS82 235 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 CYP2U1Q7Z449 544 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 TBC1D1Q86TI0 1168 aaPredicted RBP20.63■□□□□ 0.89
PNKP-203ENST00000593946 CACUL1Q86Y37 369 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 NRSN1Q8IZ57 195 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 ULK4Q96C45 1275 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 UBXN10Q96LJ8 280 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 GPR78Q96P69 363 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 BOCQ9BWV1 1114 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 SPATA16Q9BXB7 569 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 TAS2R13Q9NYV9 303 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 TMPRSS11EQ9UL52 423 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 FADS3Q9Y5Q0 445 aa20.63■□□□□ 0.89
PNKP-203ENST00000593946 DOCK9Q9BZ29 2069 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 WNT9AO14904 365 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 COL9A1P20849 921 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 SLC26A3P40879 764 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 CREB5Q02930 508 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 ITIH4Q14624 930 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 SETMARQ53H47 684 aaPredicted RBP20.62■□□□□ 0.89
PNKP-203ENST00000593946 TMEM207Q6UWW9 146 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 TRAM1L1Q8N609 369 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 KCNJ9Q92806 393 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 DTD2Q96FN9 168 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 CHMP6Q96FZ7 201 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 TSNARE1Q96NA8 513 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 ZSCAN5AQ9BUG6 496 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 CLPBQ9H078 707 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 NMRAL1Q9HBL8 299 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 ZDHHC3Q9NYG2 299 aa20.62■□□□□ 0.89
PNKP-203ENST00000593946 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.62■□□□□ 0.89
PNKP-203ENST00000593946 MTF2Q9Y483 593 aaPredicted RBP20.62■□□□□ 0.89
PNKP-203ENST00000593946 IGLV3-16A0A075B6K0 115 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 WDR91A4D1P6 747 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 NEMP1O14524 444 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 AP1G1O43747 822 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 RHOBTB1O94844 696 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 C7P10643 843 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 C6P13671 934 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 TAC1P20366 129 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 MLF2Q15773 248 aaPredicted RBP20.61■□□□□ 0.89
PNKP-203ENST00000593946 TSNAXIP1Q2TAA8 658 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 HSF5Q4G112 596 aaPredicted RBP20.61■□□□□ 0.89
PNKP-203ENST00000593946 NXNL1Q96CM4 212 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 RIOK2Q9BVS4 552 aaKnown RBP20.61■□□□□ 0.89
PNKP-203ENST00000593946 ABCG8Q9H221 673 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 IGSF5Q9NSI5 407 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 SERGEFQ9UGK8 458 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 RUVBL2Q9Y230 463 aaKnown RBP20.61■□□□□ 0.89
PNKP-203ENST00000593946 OAS3Q9Y6K5 1087 aaKnown RBP20.61■□□□□ 0.89
PNKP-203ENST00000593946 COL6A3P12111 3177 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 NUMA1Q14980 2115 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 TCP11X1B4DZS4 312 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 BIRC5O15392 142 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 NIPSNAP2O75323 286 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 BPGMP07738 259 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 LTA4HP09960 611 aaKnown RBP20.61■□□□□ 0.89
PNKP-203ENST00000593946 CCDC166P0CW27 439 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 ZNF37AP17032 561 aaPredicted RBP20.61■□□□□ 0.89
PNKP-203ENST00000593946 CD72P21854 359 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 TAS2R38P59533 333 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 IRX4P78413 519 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 PDAP1Q13442 181 aaKnown RBP20.61■□□□□ 0.89
PNKP-203ENST00000593946 SPNS2Q8IVW8 549 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 RPLP0P6Q8NHW5 317 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 ANKRD49Q8WVL7 239 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 FAM131CQ96AQ9 280 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 MECRQ9BV79 373 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 PRDM6Q9NQX0 595 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 GNPTGQ9UJJ9 305 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 COQ6Q9Y2Z9 468 aa20.61■□□□□ 0.89
PNKP-203ENST00000593946 MAN2B1O00754 1011 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 VPS26AO75436 327 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 APOA4P06727 396 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 CSHL1Q14406 222 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 FAM83EQ2M2I3 478 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 ZNF284Q2VY69 593 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 LRRC8EQ6NSJ5 796 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 ZNF765Q7L2R6 523 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 TMPRSS6Q8IU80 811 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 ADHFE1Q8IWW8 467 aa20.6■□□□□ 0.89
PNKP-203ENST00000593946 TMEM151AQ8N4L1 468 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms