RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PKN2Q16513 984 aaKnown RBP4.97□□□□□ -1.61
SMAD4-216ENST00000593223 GSTA3Q16772 222 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 ARMC4Q5T2S8 1044 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 TXNDC8Q6A555 127 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 LCTLQ6UWM7 567 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 R3HCC1LQ7Z5L2 792 aaKnown RBP4.97□□□□□ -1.61
SMAD4-216ENST00000593223 SCCPDHQ8NBX0 429 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 CADM4Q8NFZ8 388 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 NUDCD2Q8WVJ2 157 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 CHCHD6Q9BRQ6 235 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 CCDC68Q9H2F9 335 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 ZWILCHQ9H900 591 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 MAGEE1Q9HCI5 957 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 PCDHB16Q9NRJ7 776 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 OCIAD1Q9NX40 245 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 TAS2R10Q9NYW0 307 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 ZNF112Q9UJU3 913 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 LSM4Q9Y4Z0 139 aaKnown RBP4.97□□□□□ -1.61
SMAD4-216ENST00000593223 ABCA3Q99758 1704 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 KCPQ6ZWJ8 1503 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 DUOX2Q9NRD8 1548 aa4.97□□□□□ -1.61
SMAD4-216ENST00000593223 COL14A1Q05707 1796 aaKnown RBP4.96□□□□□ -1.61
SMAD4-216ENST00000593223 CCDC141Q6ZP82 1450 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 SBF2Q86WG5 1849 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 A0A1W2PPH5 198 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 FSD2A1L4K1 749 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 NPIPB11E5RHQ5 1161 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 PROB1E7EW31 1015 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 J3KR12 359 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 LDLRAD4O15165 306 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 TNFSF14O43557 240 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 TSPY4P0CV99 314 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 TSPY10P0CW01 314 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 STMN1P16949 149 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 TNFRSF8P28908 595 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 HPDP32754 393 aaPredicted RBP4.96□□□□□ -1.62
SMAD4-216ENST00000593223 CPOXP36551 454 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 GABRB2P47870 512 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 DSCR9P59020 149 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 SLMAPQ14BN4 828 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 SLC45A4Q5BKX6 768 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 GPATCH4Q5T3I0 446 aaKnown RBP4.96□□□□□ -1.62
SMAD4-216ENST00000593223 CFAP58Q5T655 872 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 CREB3L2Q70SY1 520 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 MCM10Q7L590 875 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 KRT74Q7RTS7 529 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 ZC3HC1Q86WB0 502 aaKnown RBP4.96□□□□□ -1.62
SMAD4-216ENST00000593223 TEX11Q8IYF3 940 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 CNTROBQ8N137 903 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 CLIP4Q8N3C7 705 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 SPATA18Q8TC71 538 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 ADAMTS15Q8TE58 950 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 WASF1Q92558 559 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 SNAPC3Q92966 411 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 MTBPQ96DY7 904 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 SPATA17Q96L03 361 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 MEIS3Q99687 375 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 DIAPH3Q9NSV4 1193 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 ABCF3Q9NUQ8 709 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 WDR35Q9P2L0 1181 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 MTRRQ9UBK8 725 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 TBK1Q9UHD2 729 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 GPR34Q9UPC5 381 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 RRP15Q9Y3B9 282 aaKnown RBP4.96□□□□□ -1.62
SMAD4-216ENST00000593223 NFE2L3Q9Y4A8 694 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 PEAK1Q9H792 1746 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 TNS3Q68CZ2 1445 aa4.96□□□□□ -1.62
SMAD4-216ENST00000593223 CNTNAP1P78357 1384 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 CICQ96RK0 1608 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-216ENST00000593223 hDV102S1A0JD36 115 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 EIF3CLB5ME19 914 aaKnown RBP4.95□□□□□ -1.62
SMAD4-216ENST00000593223 USP17L23D6RBM5 183 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 MPHOSPH10O00566 681 aaKnown RBP4.95□□□□□ -1.62
SMAD4-216ENST00000593223 SEC14L5O43304 696 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 SLC28A2O43868 658 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 KIF5CO60282 957 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 ZIC3O60481 467 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 ZBED4O75132 1171 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 SEC31AO94979 1220 aaKnown RBP4.95□□□□□ -1.62
SMAD4-216ENST00000593223 MMP2P08253 660 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 UBL4AP11441 157 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 FCGR1AP12314 374 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 ITGAXP20702 1163 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 GPTP24298 496 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 EPHA8P29322 1005 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-216ENST00000593223 PEX5P50542 639 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 RARSP54136 660 aaKnown RBP4.95□□□□□ -1.62
SMAD4-216ENST00000593223 UBASH3AP57075 661 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 UBXN2AP68543 259 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 SORDQ00796 357 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 DDR1Q08345 913 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 MEA1Q16626 185 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 MMEL1Q495T6 779 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 FBXO46Q6PJ61 603 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-216ENST00000593223 MEPCEQ7L2J0 689 aaKnown RBP4.95□□□□□ -1.62
SMAD4-216ENST00000593223 ENOSF1Q7L5Y1 443 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 NEXN-AS1Q8NBZ9 246 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 AGBL3Q8NEM8 1001 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 BEST2Q8NFU1 509 aa4.95□□□□□ -1.62
SMAD4-216ENST00000593223 SNX21Q969T3 373 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms