RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 RAI2Q9Y5P3 530 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 KCNU1A8MYU2 1149 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 H3BNX3 289 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 ZNF24P17028 368 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 GDI1P31150 447 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 CRHR1P34998 444 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 PDGFRLQ15198 375 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 METTL21CQ5VZV1 264 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 GALNT18Q6P9A2 607 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 PHF10Q8WUB8 498 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 AP2M1Q96CW1 435 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 P2RY11Q96G91 374 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 QKIQ96PU8 341 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 TEFMQ96QE5 360 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 NTPCRQ9BSD7 190 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 GABRQQ9UN88 632 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 SQORQ9Y6N5 450 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 ZFP37Q9Y6Q3 630 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 COLEC10Q9Y6Z7 277 aa13.26□□□□□ -0.29
SMARCA4-216ENST00000591545 GLYATL1P3A0A0U1RQE8 302 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 IDH3BO43837 385 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 RASGRP1O95267 797 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 NDST3O95803 873 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 F2P00734 622 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 UMPSP11172 480 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 MARCKSL1P49006 195 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 BLKP51451 505 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 ALG11Q2TAA5 492 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 INAVAQ3KP66 663 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 TRIM40Q6P9F5 258 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 DNAJB14Q8TBM8 379 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 SH3RF2Q8TEC5 729 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 C7orf26Q96N11 449 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 KIFC1Q9BW19 673 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 ATXN10Q9UBB4 475 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 ING4Q9UNL4 249 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 CCDC162PA2VCL2 907 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 CCR3P51677 355 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 GCNT7Q6ZNI0 430 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 DENND6AQ8IWF6 608 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 S100A13Q99584 98 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 COG5Q9UP83 839 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 A0A1W2PRU2 124 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 L1CAMP32004 1257 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 SPAM1P38567 509 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 DGKEP52429 567 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 TEX44Q53QW1 395 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 LIN54Q6MZP7 749 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 PXYLP1Q8TE99 480 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 SLC44A1Q8WWI5 657 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 SUSD3Q96L08 255 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 TRIT1Q9H3H1 467 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 FAM83DQ9H4H8 585 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 COMMD9Q9P000 198 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 NR2E1Q9Y466 385 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 IRS2Q9Y4H2 1338 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 RHPN2P1A8MT19 583 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 ERN1O75460 977 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 KLHL18O94889 574 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 PRDX6P30041 224 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 SLC5A9Q2M3M2 681 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 XKR6Q5GH73 641 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 HIPK1Q86Z02 1210 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 KLHL23Q8NBE8 558 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 PDPRQ8NCN5 879 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 CSPG4P5Q96PW8 444 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 GORASP1Q9BQQ3 440 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■□□□□ 9.7
SMARCA4-216ENST00000591545 DNAJC28Q9NX36 388 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 RAB26Q9ULW5 256 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 SSR3Q9UNL2 185 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 SLC12A4Q9UP95 1085 aa13.25□□□□□ -0.29
SMARCA4-216ENST00000591545 FPGTO14772 594 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 CXCR3P49682 368 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 DAOAP59103 153 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 RPL38P63173 70 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 CRADDP78560 199 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 C17orf64Q86WR6 236 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 LRRC17Q8N6Y2 441 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 FAM81AQ8TBF8 368 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 PTCD2Q8WV60 388 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 RHOBTB2Q9BYZ6 727 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 PRMT5O14744 637 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 UGT2B11O75310 529 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 CDH3P22223 829 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 MYL9P24844 172 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 VEGFBP49765 207 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 HNMTP50135 292 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 BIKQ13323 160 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 LSM12Q3MHD2 195 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 CXXC5Q7LFL8 322 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 PARGQ86W56 976 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 C10orf107Q8IVU9 208 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 SLC4A11Q8NBS3 891 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 MARK4Q96L34 752 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 RAD9AQ99638 391 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 S100A14Q9HCY8 104 aa13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 SAMHD1Q9Y3Z3 626 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-216ENST00000591545 PCDHB1Q9Y5F3 818 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms