RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 GOLGA6CA6NDK9 693 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 GOLGA6BA6NDN3 693 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 TMCO5BA8MYB1 307 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 C9orf172C9J069 976 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 H3BRJ5 948 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 TRAFD1O14545 582 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-226ENST00000591534 SUV39H1O43463 412 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 LCA5LO95447 670 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 CPP00450 1065 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 FGF1P05230 155 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 FAM87AP0C7U9 286 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 GOLGA6DP0CG33 693 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 ACPPP15309 386 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 VIPR1P32241 457 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 ARL4AP40617 200 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 GNPDA1P46926 289 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 OR1D5P58170 312 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 TUBB4BP68371 445 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 RALGDSQ12967 914 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 MAMLD1Q13495 774 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 SQSTM1Q13501 440 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 NR1D2Q14995 579 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 TBR1Q16650 682 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 DCAF12Q5T6F0 453 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 RAET1GQ6H3X3 334 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 BORAQ6PGQ7 559 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 NXPE4Q6UWF7 544 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 ZNF574Q6ZN55 896 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-226ENST00000591534 ZNF571Q7Z3V5 609 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-226ENST00000591534 HEATR4Q86WZ0 1026 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 ZSWIM9Q86XI8 627 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 OR4D9Q8NGE8 314 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 FNIP1Q8TF40 1166 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 KIAA1143Q96AT1 154 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-226ENST00000591534 COQ10AQ96MF6 247 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 TEFMQ96QE5 360 aaKnown RBP9.4□□□□□ -0.9
BRCA1-226ENST00000591534 DDA1Q9BW61 102 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 TEX101Q9BY14 249 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 TRIM7Q9C029 511 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 SEMA6CQ9H3T2 930 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 RDH14Q9HBH5 336 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 GOLGA6AQ9NYA3 693 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 TAAR2Q9P1P5 351 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 B4GALT6Q9UBX8 382 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 PCSK1NQ9UHG2 260 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 TUBD1Q9UJT1 453 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 DNPEPQ9ULA0 475 aa9.4□□□□□ -0.9
BRCA1-226ENST00000591534 IGHV5-10-1A0A0J9YXX1 117 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 A8MX80 341 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 CASC3O15234 703 aaKnown RBP9.39□□□□□ -0.91
BRCA1-226ENST00000591534 HTRA2O43464 458 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-226ENST00000591534 B4GAT1O43505 415 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 HEXIM1O94992 359 aaKnown RBP9.39□□□□□ -0.91
BRCA1-226ENST00000591534 ECEL1O95672 775 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 CEACAM5P06731 702 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 IVLP07476 585 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 CA4P22748 312 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SERPINB6P35237 376 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 ETV5P41161 510 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 GPR1P46091 355 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 CCR10P46092 362 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 RGRP47804 291 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 LIMK2P53671 638 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 CDH6P55285 790 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 CCZ1BP86790 482 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 CCZ1P86791 482 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-226ENST00000591534 CDK3Q00526 305 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 DPTQ07507 201 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 LRP8Q14114 963 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 BOLA3Q53S33 107 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 DNTTIP2Q5QJE6 756 aaKnown RBP9.39□□□□□ -0.91
BRCA1-226ENST00000591534 ARMC12Q5T9G4 340 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 MARC1Q5VT66 337 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 DENND2CQ68D51 928 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 PLEKHA7Q6IQ23 1121 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SLC30A9Q6PML9 568 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 TMCO3Q6UWJ1 677 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 VASH2Q86V25 355 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 C17orf82Q86X59 251 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-226ENST00000591534 LRRC49Q8IUZ0 686 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SYCE1Q8N0S2 351 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 OR10G6Q8NH81 332 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 PMEPA1Q969W9 287 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SH3KBP1Q96B97 665 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 DTD2Q96FN9 168 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SCRN2Q96FV2 425 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 CCDC74BQ96LY2 380 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 NUDCD1Q96RS6 583 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 ZPBPQ9BS86 351 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SNRNP25Q9BV90 132 aaKnown RBP9.39□□□□□ -0.91
BRCA1-226ENST00000591534 LGR4Q9BXB1 951 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SUDS3Q9H7L9 328 aaPredicted RBP9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SPATS2LQ9NUQ6 558 aaKnown RBP9.39□□□□□ -0.91
BRCA1-226ENST00000591534 GPATCH2LQ9NWQ4 482 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SLC39A1Q9NY26 324 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 KCNK4Q9NYG8 393 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 FOXJ2Q9P0K8 574 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SUFUQ9UMX1 484 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 SLC17A4Q9Y2C5 497 aa9.39□□□□□ -0.91
BRCA1-226ENST00000591534 PIEZO2Q9H5I5 2752 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms