RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ACP1P24666 158 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 VPS41P49754 854 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 ZNF140P52738 457 aaPredicted RBP11.41□□□□□ -0.58
VMP1-211ENST00000591315 POU6F1Q14863 301 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 TAF1AQ15573 450 aaPredicted RBP11.41□□□□□ -0.58
VMP1-211ENST00000591315 CCDC38Q502W7 563 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 CERCAMQ5T4B2 595 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 CRTC3Q6UUV7 619 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 GKN2Q86XP6 184 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 RAVER1Q8IY67 606 aaKnown RBP11.41□□□□□ -0.58
VMP1-211ENST00000591315 CCDC89Q8N998 374 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 IFI44Q8TCB0 444 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 MAGOHBQ96A72 148 aaKnown RBP11.41□□□□□ -0.58
VMP1-211ENST00000591315 DNAJC1Q96KC8 554 aaKnown RBP11.41□□□□□ -0.58
VMP1-211ENST00000591315 OR2M4Q96R27 311 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 ZSCAN5AQ9BUG6 496 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 DUSP23Q9BVJ7 150 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 LRRC40Q9H9A6 602 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 ARNT2Q9HBZ2 717 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.41□□□□□ -0.58
VMP1-211ENST00000591315 HACD3Q9P035 362 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 TAAR2Q9P1P5 351 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 SLC23A2Q9UGH3 650 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 ANGPTL2Q9UKU9 493 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 KCNK6Q9Y257 313 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 ZZEF1O43149 2961 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 ACACAQ13085 2346 aa11.41□□□□□ -0.58
VMP1-211ENST00000591315 ZNF106Q9H2Y7 1883 aaKnown RBP11.4□□□□□ -0.58
VMP1-211ENST00000591315 GLYATL1P3A0A0U1RQE8 302 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 ACP5P13686 325 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 LPOP22079 712 aaPredicted RBP11.4□□□□□ -0.58
VMP1-211ENST00000591315 SPAM1P38567 509 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 CDKN1CP49918 316 aaPredicted RBP11.4□□□□□ -0.58
VMP1-211ENST00000591315 ARSDP51689 593 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 MAZP56270 477 aaKnown RBP11.4□□□□□ -0.58
VMP1-211ENST00000591315 SHC2P98077 582 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 XIAPP98170 497 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 INSM1Q01101 510 aaPredicted RBP11.4□□□□□ -0.58
VMP1-211ENST00000591315 FOXK2Q01167 660 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 SEMA5AQ13591 1074 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 PEX6Q13608 980 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 SEPT6Q14141 434 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 NR0B2Q15466 257 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 PLA2G4EQ3MJ16 856 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 HS1BP3Q53T59 392 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 CHST15Q7LFX5 561 aaPredicted RBP11.4□□□□□ -0.58
VMP1-211ENST00000591315 GSTA5Q7RTV2 222 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 GALNT13Q8IUC8 556 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 ZNF547Q8IVP9 402 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 BRSK1Q8TDC3 778 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 MAIP1Q8WWC4 291 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 CAPZA3Q96KX2 299 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 PLEKHG4BQ96PX9 1271 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 SRPK1Q96SB4 655 aaKnown RBP11.4□□□□□ -0.58
VMP1-211ENST00000591315 DPEP2Q9H4A9 486 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 TRIM39Q9HCM9 518 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 TRNAU1APQ9NX07 287 aaKnown RBP11.4□□□□□ -0.58
VMP1-211ENST00000591315 PAK5Q9P286 719 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 TTC7AQ9ULT0 858 aaPredicted RBP11.4□□□□□ -0.58
VMP1-211ENST00000591315 PADI4Q9UM07 663 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 ZKSCAN5Q9Y2L8 839 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 PKP3Q9Y446 797 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 PCDHGA1Q9Y5H4 931 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 USP24Q9UPU5 2620 aa11.4□□□□□ -0.58
VMP1-211ENST00000591315 COL27A1Q8IZC6 1860 aaPredicted RBP11.4□□□□□ -0.59
VMP1-211ENST00000591315 WDFY3Q8IZQ1 3526 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 ANKRD11Q6UB99 2663 aaPredicted RBP11.39□□□□□ -0.59
VMP1-211ENST00000591315 EME2A4GXA9 379 aaPredicted RBP11.39□□□□□ -0.59
VMP1-211ENST00000591315 C1QTNF9BB2RNN3 333 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 PGRMC1O00264 195 aaKnown RBP11.39□□□□□ -0.59
VMP1-211ENST00000591315 NUAK1O60285 661 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 OPA1O60313 960 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 ZNF189O75820 626 aaPredicted RBP11.39□□□□□ -0.59
VMP1-211ENST00000591315 TRIM16O95361 564 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 PYGLP06737 847 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 APRTP07741 180 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 C1QTNF9P0C862 333 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 FDFT1P37268 417 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 COILP38432 576 aaPredicted RBP11.39□□□□□ -0.59
VMP1-211ENST00000591315 ACTR1BP42025 376 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 LMAN1P49257 510 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 CTSCP53634 463 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 ACTR1AP61163 376 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 CRADDP78560 199 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 ILF3Q12906 894 aaKnown RBP eCLIP11.39□□□□□ -0.59
VMP1-211ENST00000591315 SMAD1Q15797 465 aaKnown RBP11.39□□□□□ -0.59
VMP1-211ENST00000591315 GPRC6AQ5T6X5 926 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 HES3Q5TGS1 186 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 OGFOD3Q6PK18 319 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 LVRNQ6Q4G3 990 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 TMPRSS7Q7RTY8 843 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 ARL10Q8N8L6 244 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 RASGEF1AQ8N9B8 481 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 GPR156Q8NFN8 814 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 GDAP1Q8TB36 358 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 ZNF398Q8TD17 642 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 ZDHHC1Q8WTX9 485 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 CCDC74AQ96AQ1 378 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 ZNF778Q96MU6 729 aa11.39□□□□□ -0.59
VMP1-211ENST00000591315 PPP1R2P1Q96PQ5 205 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms