RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 AGAP2Q99490 1192 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 GORASP1Q9BQQ3 440 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 RIOK2Q9BVS4 552 aaKnown RBP11.15□□□□□ -0.62
SMAD4-211ENST00000590499 C10orf88Q9H8K7 445 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 MAGEE1Q9HCI5 957 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 NCKIPSDQ9NZQ3 722 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 KLHL8Q9P2G9 620 aaPredicted RBP11.15□□□□□ -0.62
SMAD4-211ENST00000590499 NFKBIL1Q9UBC1 381 aaPredicted RBP11.15□□□□□ -0.62
SMAD4-211ENST00000590499 FAM153AQ9UHL3 310 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 TRHDEQ9UKU6 1024 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 CNOT6Q9ULM6 557 aaKnown RBP11.15□□□□□ -0.62
SMAD4-211ENST00000590499 SLC17A4Q9Y2C5 497 aa11.15□□□□□ -0.62
SMAD4-211ENST00000590499 UNC13CQ8NB66 2214 aa11.15□□□□□ -0.63
SMAD4-211ENST00000590499 RGSL1A5PLK6 1076 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 TMEM8BA6NDV4 472 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 A6NJY4 79 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 H7C0C1 242 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 PMPCBO75439 489 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 TJP3O95049 919 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 EPOP01588 193 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 PYGLP06737 847 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 IVLP07476 585 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 CTSEP14091 401 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 GPR1P46091 355 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 ATP5OP48047 213 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 DUSP3P51452 185 aaPredicted RBP11.14□□□□□ -0.63
SMAD4-211ENST00000590499 WNT3AP56704 352 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 DCDC1P59894 354 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 CCZ1BP86790 482 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 CCZ1P86791 482 aaPredicted RBP11.14□□□□□ -0.63
SMAD4-211ENST00000590499 E2F1Q01094 437 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 NR0B2Q15466 257 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 PCSK7Q16549 785 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 CDCP2Q5VXM1 449 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 GUSBP11Q6P575 273 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 ZNF662Q6ZS27 426 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 KDELC2Q7Z4H8 507 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 TMC3Q7Z5M5 1100 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 GKN2Q86XP6 184 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 LRRC8AQ8IWT6 810 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 DEPDC4Q8N2C3 294 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 UBL4BQ8N7F7 174 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 ARL10Q8N8L6 244 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 DCBLD1Q8N8Z6 715 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 KYQ8NBH2 561 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 CCL4L1Q8NHW4 92 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 IFI44Q8TCB0 444 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 FAM118BQ9BPY3 351 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 TSGA10Q9BZW7 698 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 TMEM168Q9H0V1 697 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 GBA3Q9H227 469 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 CYP4F12Q9HCS2 524 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 UBP1Q9NZI7 540 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 ZNF711Q9Y462 761 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 SPO11Q9Y5K1 396 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 ZNF106Q9H2Y7 1883 aaKnown RBP11.14□□□□□ -0.63
SMAD4-211ENST00000590499 KIF26BQ2KJY2 2108 aa11.14□□□□□ -0.63
SMAD4-211ENST00000590499 GOLGA6CA6NDK9 693 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 GOLGA6BA6NDN3 693 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 FADS2P1A8MWK0 482 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 OPA1O60313 960 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 PIRTP0C851 137 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 GOLGA6DP0CG33 693 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 RBP3P10745 1247 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 CETN2P41208 172 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 POLD2P49005 469 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 EIF3EP60228 445 aaKnown RBP11.13□□□□□ -0.63
SMAD4-211ENST00000590499 TCEA2Q15560 299 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 ST3GAL2Q16842 350 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 CCDC181Q5TID7 509 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 OGFOD3Q6PK18 319 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 PID1Q7Z2X4 250 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 EFL1Q7Z2Z2 1120 aaKnown RBP11.13□□□□□ -0.63
SMAD4-211ENST00000590499 TRIM74Q86UV6 250 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 NRROSQ86YC3 692 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 CDKL3Q8IVW4 592 aaPredicted RBP11.13□□□□□ -0.63
SMAD4-211ENST00000590499 KLHDC8BQ8IXV7 354 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 GPR156Q8NFN8 814 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 CCHCR1Q8TD31 782 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 GPBAR1Q8TDU6 330 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 HIC2Q96JB3 615 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 FAM83DQ9H4H8 585 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 CARS2Q9HA77 564 aaKnown RBP11.13□□□□□ -0.63
SMAD4-211ENST00000590499 ZFYVE1Q9HBF4 777 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 TRNAU1APQ9NX07 287 aaKnown RBP11.13□□□□□ -0.63
SMAD4-211ENST00000590499 GOLGA6AQ9NYA3 693 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 PKD2L2Q9NZM6 624 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 RSPH14Q9UHP6 348 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 SUFUQ9UMX1 484 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 SHOC2Q9UQ13 582 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 ST14Q9Y5Y6 855 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 CHD6Q8TD26 2715 aa11.13□□□□□ -0.63
SMAD4-211ENST00000590499 TCRBV7S2A1N4TA0A589 114 aa11.12□□□□□ -0.63
SMAD4-211ENST00000590499 CPED1A4D0V7 1026 aa11.12□□□□□ -0.63
SMAD4-211ENST00000590499 F5H423 210 aaPredicted RBP11.12□□□□□ -0.63
SMAD4-211ENST00000590499 CDK2AP1O14519 115 aa11.12□□□□□ -0.63
SMAD4-211ENST00000590499 AURKAO14965 403 aa11.12□□□□□ -0.63
SMAD4-211ENST00000590499 KRT86O43790 486 aa11.12□□□□□ -0.63
SMAD4-211ENST00000590499 NOBOXO60393 691 aa11.12□□□□□ -0.63
SMAD4-211ENST00000590499 CHRNA4P43681 627 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms